Clostridium sp. BNL1100: Clo1100_0085
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Entry
Clo1100_0085 CDS
T01708
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V), alpha subunit/helicase superfamily I member
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
clb
Clostridium sp. BNL1100
Pathway
clb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Clo1100_0085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_0085
Enzymes [BR:
clb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Clo1100_0085
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clo1100_0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
nSTAND3
PhoH
AAA_22
UvrD-helicase
PTPlike_phytase
OB_YrrC
T2SSE
DEAD
AAA_29
AAA_23
SMC_N
AAA_16
Ribosomal_S13
FtsK_SpoIIIE
NPHP3_N
NACHT
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEY64377
UniProt:
H2JFL3
LinkDB
All DBs
Position
88073..90472
Genome browser
AA seq
799 aa
AA seq
DB search
MATGQFQQQRWSFDSYPVGATLSIIGRFDYKIYENADNGYKIYTFDIERIVDEDGFEHEA
QDLISVTGYYEVNDHCAVLPCKIVGTVGVYKGEKQLKADIVEFIEPATDEGIITFLSCGI
IKGVGEKTARNIVVGYKTASGFIEGFGSNTLEIIKNEPLSLVKIKGISADKARLIHDSYM
ENMEYQNVMIFFQKFGVSSAKAMKIYNTFKGTSITIAEQNPYMFTNIKGFGFRTCDEIAK
KLGIDSHSIFRMEAALKSVLEAAETEGHCYLYRQQLLQATSKALSDNVDKISEDELEEAY
KRMIKTGLLVNITYTENEDRYEAVYTREMQKLEYETALAIKNIVRCQPEVSVVHVDKLIE
EFEELKGFELEAMQKESVRAVFETNMLILTGSAGSGKTTTVECMIYVLQRVFENREEMSF
MLAAPTGKAAKRLTEITGFEAMTIHRLLQFSYENKGFFYRQGNELPYDLIVIDESSMLSI
DLAHALFTAISPGTTVVMIGDTQQLPSVGAGNVLDDMIKSGVIPTVKLNVIKRQADGSGI
ISNANRIINGEMPEIINQNKDFFVIEEDDKYRVVKKTQEALNRLMTAYNHTIDDIQIICP
QKSSEIGTYELNKAIQEMVNPAEENKQEIKRGNSVFREGDKVIHLSNNYETPHYQRDPET
GRYFAEENCGIFNGDIGRIIEISNIKEIESEDEDASTPEKKVAVQYDDFIIIYHVNELEE
IDLAYCLTVHKMQGSQCEAAIILCHMRNYVMLNRNLGYTAVTRAKKMACIIGQKKAIKLM
VSNVKINERNSMLCDLLKL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacaggacaatttcaacagcaaagatggtcatttgacagttaccctgtgggggca
acgctaagcattattggccggtttgactataaaatatatgaaaatgcagacaatggctat
aaaatctatacttttgatatagaaagaattgttgatgaggatggatttgagcatgaagcc
caggaccttataagtgtaacaggatattatgaggtgaatgaccattgtgcggttctaccc
tgtaaaattgtcggtaccgtaggagtatacaaaggtgaaaaacagcttaaggctgatatt
gtagaatttattgaacctgctacggatgaaggaataataacctttctatcatgtggaata
atcaagggcgtgggagaaaaaaccgcaagaaatattgttgtcggctacaaaacagcttca
ggtttcatcgagggctttgggagcaacacgttggagattataaagaacgaaccactttct
cttgtgaaaataaaaggtatatctgctgataaagcgaggcttatccacgattcctatatg
gaaaacatggagtatcagaacgttatgattttctttcaaaaatttggggtatcatcagct
aaggcaatgaagatctacaatactttcaaaggaacctccataactattgccgagcagaac
ccatatatgtttacgaatataaaaggctttgggtttagaacctgtgatgaaatagcaaaa
aaactgggaatagattctcactctatattcagaatggaagccgcccttaaaagcgtattg
gaagcagctgaaacagaaggacattgctacttatacagacaacagcttttacaggcaact
tcaaaagctttaagtgataatgttgataaaatcagcgaggatgaactggaagaagcctat
aagagaatgataaaaacgggacttcttgtgaatataacatatacagaaaatgaagataga
tatgaagctgtttatacaagggaaatgcaaaaacttgaatacgagactgcacttgccatt
aaaaatatagtgaggtgtcagcctgaagttagcgtggtacatgtggacaagttgatagag
gagtttgaagagctgaaaggctttgaacttgaagccatgcaaaaggaatctgttagagct
gtttttgaaacaaacatgctgattctcaccggttctgccggaagtggaaaaactactact
gtagaatgtatgatatatgtgttgcaaagagtttttgagaaccgtgaggaaatgagtttt
atgctggcagcaccaacaggaaaggctgctaaaagacttacagaaataacgggttttgaa
gcaatgaccatacaccggcttcttcaattttcctacgaaaataagggctttttttacaga
caaggcaacgaacttccatatgacctaattgtaatcgatgaaagctcaatgcttagtata
gacctggcccatgcattgtttactgctatttcacctgggacaaccgtagttatgattggt
gatacgcaacagctcccatcggtaggtgcgggaaatgtgcttgatgatatgataaaaagt
ggagttatacctacggttaagttaaatgttataaagcgtcaagcagacgggtccggcatt
atttcaaatgccaacagaattataaatggcgaaatgcctgaaataatcaatcaaaacaag
gatttctttgtaattgaagaagatgacaaatacagggttgtaaagaagactcaggaagca
ttaaacaggcttatgacagcctataaccacacaatagatgatattcaaataatttgcccg
caaaaatcttctgaaatcgggacgtatgaattaaacaaagcaatacaggagatggttaat
cctgcagaagaaaataaacaggaaataaaaagaggaaatagtgttttcagagaaggagac
aaggttattcacctaagcaataattacgagactcctcattatcagagagaccccgaaacc
ggaagatattttgctgaagagaactgtggcatttttaacggcgatatagggaggattatt
gaaatatccaatatcaaagaaattgaatcagaggatgaggatgcaagcacacctgaaaag
aaggtagcggttcagtatgatgattttataataatttatcatgtaaatgaacttgaggag
atagatctggcatattgcctgacagttcataaaatgcaggggtcccaatgcgaagctgca
attatactatgtcatatgagaaactatgttatgctgaacagaaatcttggatatacagct
gttacaagagccaaaaaaatggcgtgtattataggacaaaagaaggcaataaaattaatg
gtttcaaatgttaaaattaatgaaagaaattcaatgctctgcgaccttttaaagttatga
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