Clostridium sp. BNL1100: Clo1100_0142
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Entry
Clo1100_0142 CDS
T01708
Name
(GenBank) DNA-binding domain-containing protein, AraC-type
Organism
clb
Clostridium sp. BNL1100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
GGDEF_2
MCP-like_PDC_1
HTH_58
HAMP
Coa1
ArsC
Motif
Other DBs
NCBI-ProteinID:
AEY64433
UniProt:
H2JFR9
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Position
complement(146619..148904)
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AA seq
761 aa
AA seq
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MMKNYSIIVKLMIVLSLFIIIPIITITFIFNYGIMKYSEDEIGRSGLGKLDSAKSVTDLL
AQTISNESLHLSLDETLNKLYGMDDIHQAIKDSDNNLMLYQFVSKLSDIVKTNNAYSSVY
LYLDNSNYVATSNGVYPKDNFPDDTWLKSYIKSKELGEPLSWTNPRPSDTNGNSSVISYI
FPLTYTTNLKGSITINVYESRLSTLINSNNYDISDFISIINSKGEVISSVDKSILNKNLS
NISYISKILGSSIERGHFIESINGKRFLITYLKTGAENWTYVGVFSLNTLTTKVNSLKMS
IIYISIFLLVLFVLLSYVISRRLFNPVKKLVQEIKSRKGIDIIGNGNEFTLLSKTFDAMI
KQEDQLFRTIEKDHKNLRENYLLSLLRGKPSIVEDEMNLFPLKNTLCCVIYIDKYNDFVS
NFSYEHQYYLKSVILNLSEEKVGESYKCSGVVLDGDKMVLIVNISAEDAVSVTSVLKNAF
SIVQREAAKVIETTISVCLGGIYDDILNIRNSYNEAQNLIKQRFMMGHEAFISQKEESSD
TNKYFYPFNIEKQLFNNIDIGSKDALLISLSCFFDEIKQNKNLSYDNVMLILNQLLGNTI
KYLLDLNISVSKVFGNDFNIYSKLAEIETLDEAGLFLSNIYLQIIEYNEKFKVEGTSHIV
KILDYIHKNYKKDIAINTLAEHVGLSYSHVRKIFNDETGENIVNYINNMRIEEAQRLLRQ
TNMNINDIALSLGYNNKQSFNRFFKKYVGINPGEYRSIKAN
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaattattcgataattgtgaaattaatgattgtcctttctctttttataata
atacctattattactattacttttattttcaattatgggataatgaagtactcagaagat
gaaataggtcgttccggtcttggtaagcttgattctgcaaaaagcgttactgatcttttg
gctcagactattagtaatgagagccttcatctttctttggatgaaactcttaacaaatta
tatggcatggatgatatacatcaagccattaaggacagcgataacaatttaatgctgtat
cagtttgtatccaagctatcagacatagttaaaactaacaatgcctattcctccgtgtac
ttgtacttagacaattcaaattatgtagcaacaagcaatggcgtgtatcccaaggataac
tttcccgatgatacctggcttaaatcctatataaaaagcaaagagttgggagagccgtta
tcatggacaaatcccagaccaagcgataccaacggaaacagctccgttatttcatatata
ttccctttaacctataccacaaatcttaaagggtctattaccataaatgtatatgaaagc
agacttagcacattaataaacagcaataactacgatatcagcgactttataagtattata
aattccaagggtgaagtaatatcttctgttgataagagcatcctaaataagaacttgtca
aatatatcctatatatccaagattctgggcagtagtatagaaagaggacattttatagaa
agcattaacggtaaaaggtttcttattacatatctgaaaactggagccgaaaattggaca
tatgtaggtgtcttttctctgaataccctgactaccaaggtaaactcactgaaaatgtcc
ataatttatatttcaatattcttattagtactttttgtactgctgtcatatgtaatttca
cgtagattgttcaaccccgtaaaaaaactggtacaggaaataaaatccagaaaaggtatt
gacattataggaaatggaaatgagttcacccttctgtccaaaacctttgatgctatgata
aagcaagaggatcagttattccgtaccattgaaaaggatcataaaaatctccgtgaaaac
tatttactgagccttttaagaggaaagccttcaatcgtcgaagatgaaatgaatcttttc
ccgttgaagaacaccctgtgctgtgtaatatacatagataagtacaatgatttcgtatca
aacttctcatacgagcatcagtattatcttaaatcagtaatattgaacctgtctgaagaa
aaggtaggtgaatcttataaatgttcaggtgttgttttagatggggataagatggttctt
atcgtaaatatttccgctgaggatgctgtaagtgttacttccgtattgaaaaatgctttc
tctattgttcagagggaagcggcaaaagttatagaaacaaccatatctgtttgtctcgga
ggtatttacgatgacattctgaatataaggaattcgtataatgaggcgcagaatctcata
aaacaaagatttatgatgggacacgaggcttttataagtcaaaaggaagagtcatctgac
accaacaagtatttttacccctttaatatagaaaaacagctattcaacaatattgatatc
ggttcaaaagatgcacttttaatttccctaagctgtttttttgatgaaattaagcaaaat
aagaacctcagctatgacaatgttatgctcatactgaaccagttacttggaaacaccatt
aagtatttgctggatttaaacatcagcgtcagcaaggtttttggaaatgactttaacata
tacagtaagcttgcagagattgaaactcttgacgaggcaggtttgttcctgtcaaatatt
tatttgcagattattgagtacaatgaaaagttcaaggttgaagggacatcccatatagtc
aaaattttggattacattcataaaaattacaaaaaggatattgcaattaatactcttgca
gaacatgtgggacttagctattcccacgtaagaaagatatttaatgacgagaccggtgag
aacattgttaactatataaacaacatgagaattgaagaagcacagcgactcctgcgtcaa
acaaacatgaatattaatgatatagcacttagtctaggatataacaataaacagagcttc
aacaggttctttaagaaatatgtaggtattaaccccggagaatacagaagtataaaggcc
aattga
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