Clostridium sp. BNL1100: Clo1100_0470
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Entry
Clo1100_0470 CDS
T01708
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clb03016
]
Clo1100_0470
Enzymes [BR:
clb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Clo1100_0470
Transfer RNA biogenesis [BR:
clb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clo1100_0470
Prokaryotic type
Clo1100_0470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AEY64752
LinkDB
All DBs
Position
502129..502866
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AA seq
245 aa
AA seq
DB search
MRKIKITIEYDGTDYHGWQVQKNAKTVQEVIQKAISKLLGEEVGVTGCSRTDVGVHAYGQ
VAHFLTESQIPGDKFSYAINNLLPDDIVIKHSEEVTGEFHARYSTKGKKYRYLIYNAPHP
SAIMRNRSCHVRPKLNIAQMQKATEYFIGEHDFAAFQATGGQVRSTVREIYSMEVSEKED
NMIYIEVTGNGFLYNMVRIIAGTLIYVGMGKLHESEIPSLIAGLDRTKAGKTAPAQGLYL
MEIYY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaattaagattactattgaatatgacggtacagattatcatggttggcaggtt
cagaaaaatgctaaaacagtacaggaagtaattcaaaaagcgatttctaagctattgggt
gaagaggttggggttacaggctgcagtcggacggatgtaggagtacatgcatacgggcaa
gttgcacattttctgacagagtcccaaataccaggagataagttctcttatgctataaat
aatttgttgcctgatgatatagttataaagcactcagaagaggttacgggagaatttcac
gcaagatactctacaaagggtaaaaagtacaggtacctgatatacaatgctccacaccca
tcagctattatgagaaacagatcttgccatgtaaggcctaaacttaacattgcgcaaatg
caaaaagcaaccgagtattttataggggaacatgattttgcagcatttcaggccacagga
ggacaggttagaagtactgtaagagagatttatagtatggaagtttctgagaaagaagat
aatatgatttacatagaggttaccggaaacggatttctgtataatatggtaagaataata
gcaggaactctaatatacgtggggatgggaaagctgcatgagtctgaaatcccctctctt
attgcagggcttgacaggacaaaggcaggtaagaccgcacctgcacaggggttgtattta
atggagatctactattag
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