Clostridium sp. BNL1100: Clo1100_0670
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Entry
Clo1100_0670 CDS
T01708
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
clb
Clostridium sp. BNL1100
Pathway
clb00300
Lysine biosynthesis
clb00470
D-Amino acid metabolism
clb01100
Metabolic pathways
clb01110
Biosynthesis of secondary metabolites
clb01120
Microbial metabolism in diverse environments
clb01230
Biosynthesis of amino acids
Module
clb_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
clb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Clo1100_0670
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Clo1100_0670
Enzymes [BR:
clb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Clo1100_0670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Ala_racemase_N
Nudix_hydro
Motif
Other DBs
NCBI-ProteinID:
AEY64941
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Position
742618..743868
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AA seq
416 aa
AA seq
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MTEYYSTKTNFFGNSNPDKLIKEYGSPLYVYNEKILRQKCRDMKNLVDYKNFIPNYSIKA
NSNLTILKIVKEEGLRADAMSAGEIQLLLHAGFKPENLFFVPNNVSESELKYAVDNGVLV
SVDSLSQLEMLGKINPGGKAAVRFNPGVGAGHHEKVVTAGKKTKFGVNIDCVDEVKAIAK
KYNMKICGVNQHIGSLFMEGDSYIEGVKSLLAVAEQFEDIDFVDMGGGFGIPYKKQEGQE
PLDLASFKEKLTQVLEQWTDKYGKKILFKTEPGRYIVAESGVLLGNVYATKANYGNKYVG
TDIGFNVLARPVMYDSHHDIEVYRNGSPLNDSQVEDVTVVGNICESGDIIAKSRELPVIQ
EGDILGIMDAGAYGFAMSSNYNMRLRPAEVLIKENGEPVLIRRRDTFEDLIANFNI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatactattcaacaaaaacaaactttttcggtaattcaaatccggataaacta
ataaaggaatatgggagtcccttgtatgtctacaatgaaaaaatattgagacaaaaatgc
agagatatgaagaatcttgtggattacaaaaacttcattcccaactattctataaaggca
aattcaaaccttactattctaaaaattgtcaaggaagaaggccttagagctgatgccatg
tctgcaggagaaatccagcttttgcttcacgcagggtttaagcctgaaaatctgtttttt
gtgccaaacaacgtatcagaatcagaattaaagtatgcggttgacaatggtgtactggta
agtgtggattcactttcacagcttgaaatgctcggtaaaattaatccgggaggaaaagcc
gctgtaaggtttaatccgggagttggagcaggacaccatgaaaaggttgtaacagccgga
aagaaaacaaagttcggagtaaacattgactgcgtggatgaggttaaggcaattgccaaa
aagtataatatgaaaatctgcggtgtaaaccagcacataggttcattgtttatggaaggc
gattcatatatagaaggggtaaaatccttacttgctgtagcagaacagtttgaagatata
gatttcgttgatatgggcggaggtttcggaataccttataaaaagcaggaaggccaagag
ccccttgatttggcaagctttaaggaaaagcttacacaggttcttgagcaatggactgac
aaatatggaaagaagatactgtttaaaaccgagccgggccgttatatagttgctgaaagc
ggagtattactgggtaatgtttatgccacaaaggccaactatggaaacaagtatgttggt
actgacattggattcaatgtactggcaaggcccgttatgtacgattcacaccacgacata
gaagtgtacagaaacggaagtcctttaaatgacagtcaggtagaagatgtaacagtagta
ggtaatatctgcgagagcggtgatattattgcaaaaagcagagaactccctgttatacag
gaaggagatattcttggaataatggatgcgggtgcctacggttttgcaatgagttcaaac
tacaatatgaggctaagacctgcagaagtacttatcaaggaaaacggtgagcctgttttg
ataagacgcagggatacttttgaagacttgatagcaaacttcaatatataa
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