Clostridium sp. BNL1100: Clo1100_0928
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Entry
Clo1100_0928 CDS
T01708
Name
(GenBank) dockerin-like protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Clo1100_0928
Enzymes [BR:
clb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Clo1100_0928
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
Dockerin_1
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
AEY65185
UniProt:
H2JDD5
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Position
1105820..1108306
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AA seq
828 aa
AA seq
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MLRKVFLGFLISVMLLTCCSFQQAALAATARQMENLDRGVVAVKVSNGVFVSWRVLGTET
ADVTYNLYRDSVKLTNISGASNYIDKSGTASSKYSVSAVVNSSEQQISPSVSVWGSNYLQ
IPLQIPEGGTTPDGVAYTYSANDCSVGDLDGDGQYEIILKWDPSNAKDNSQSGYTGNVYI
DAYKLNGKRLWRIDLGKNIRAGAHYTQFMVYDLNGDGKAEMACKTSDGTKDGIGNVIGNA
GADYRNSSGYVLSGSEYLTIFDGNTGKALYTGDYEPGRGTVSSWGDSYGNRVDRFLACIA
YLDGMHPSLVMCRGYYTRAVLVAYDWNGSTLTKRWTFDSNSSGNSGYAGQGNHNLSVADV
DDDGKDEIIYGSCTVDDSGKGLYTTGLRHGDSMHLGDLNPNRPGLEVWSCHEDVAGNGGV
GASFRDAKTGNVIFKFEASDDVGRACSADLTAQYPGEEVWAAGSPLYSCTGQNIGSAPSQ
KNFAIWWDGDELRELLDGTSITKYGGGTLLSAGGCSSNNGTKSTPCLQADILGDWREEAV
WRTSDNKYLNIYTTTDLTSRRIYTLMHDPVYRLGIAWQNVAYNQPPHTGFFLGSGMTAPP
QPSIYLAGGNPITVDGKLIKALTVNDTENSGDWSIQPNLQIGDLVYGDRTFKFTQIPQSL
IGSEWIRTACDSKMYTSDEASFTAKSDISVYVGLDTRATSIPAWLNGWNATGEILVSDNN
SVEYNIYKKDYAANSLVTLGTNGASASIVNYVVIVKPQTTDFLLGDANGDGEVNSLDYAT
LKSYLLGKISLSQEAMKAVDFNNDNTIDAIDLALFRKNLLGGPIYTIN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaaaggtgtttctaggctttttaattagtgtaatgctgttaacttgttgtagt
tttcaacaagcagcattggctgcaacggcacgccaaatggaaaatttggataggggtgta
gtggcggttaaagtcagcaatggtgtttttgtaagttggcgcgtgttgggaaccgaaaca
gctgatgtaacctataatctttaccgggactcagtgaagttgaccaacatatccggggca
agcaactatattgacaagtcagggactgcaagctcaaagtactctgtaagtgccgtagta
aatagcagtgaacagcagatatcaccatcggtaagtgtatggggaagtaattatctgcag
attcctctccagattccggagggaggaaccacacctgacggagtggcctatacatatagt
gccaatgactgcagtgttggggatctggatggtgacggacaatatgaaattattttaaaa
tgggatccgtcaaatgccaaggacaactcccaaagcggctataccgggaatgtatacatt
gatgcctataaattgaacggtaaacgtctatggaggattgatctgggaaaaaatatccgt
gcaggtgcccattatacacaattcatggtatacgatctgaatggcgacggtaaagctgag
atggcatgtaaaacgtcagacggtacaaaagacggtattgggaatgtaataggcaatgcc
ggagcagactatcgtaattcatcaggatatgtactttcaggatctgagtacctgaccata
ttcgatggaaatacgggtaaggctctttacacaggggactatgaacccggcagaggtact
gtttccagttggggagattcttacggtaaccgtgtagaccgttttctggcatgcattgct
tatttggatggtatgcaccccagtcttgttatgtgccggggatattatacaagggcagta
ttagttgcatacgactggaatggttcaaccttaactaaacgctggacatttgacagtaat
agcagcggtaattccggttatgccggacaaggtaaccacaatcttagtgtagctgatgtg
gatgatgatggaaaggacgagataatctacggttcctgtaccgttgacgattccggaaag
ggactgtacactacaggtttgaggcacggggattcaatgcatctgggtgatcttaatccc
aataggcccggccttgaagtctggtcctgccatgaggacgtagccggtaatggaggagtc
ggtgcatccttccgtgatgcaaagactggaaacgtgatttttaagtttgaggcgtccgac
gatgttggaagggcgtgttcggccgatttgaccgcacaatatccgggtgaggaggtatgg
gcagcaggctcaccgttgtatagctgtacaggccagaatatcggttctgcaccttcccag
aagaatttcgcaatatggtgggacggtgatgaactccgtgagcttttagacggtacaagc
atcactaaatatggcggaggaactttgctttctgcaggaggctgttcttcaaacaacggc
acaaaatccactccctgccttcaggcggacattctgggagactggagagaagaggctgta
tggagaacctccgataacaaatatttaaatatttatactaccacagatttgacaagcaga
cgtatttatacattaatgcacgaccctgtatacagactgggaatagcctggcaaaacgta
gcatacaaccagcctccacataccggctttttcctgggaagtggcatgacagcaccaccg
cagccttccatatatttagcaggaggtaatccgattactgttgatggtaaactgataaag
gctttaacagtaaatgataccgaaaattccggtgactggtcaatccaaccaaatctgcag
attggcgacttggtatatggcgataggacattcaaattcacacaaattccacaaagtctt
attggttcagaatggataaggactgcatgtgattcaaaaatgtatacgtcagatgaagcc
tcttttaccgcaaaatccgatatttcagtttatgtaggtttggatacaagagctacaagt
attccagcatggctaaacggctggaatgcaacaggggaaatcttggtaagcgataataat
tctgttgaatacaatatttataaaaaggattatgcagcaaattctcttgtaacccttggc
acaaacggtgcttccgcaagcatagtaaattatgttgttattgtaaagccacagacaact
gatttccttttaggtgatgcaaatggtgatggggaagtaaattctcttgattatgctacc
ctcaagtcatatctactgggaaagataagtttatcacaggaagccatgaaggcggtagat
tttaataatgataatacaatagatgctattgatttggctttgttcagaaagaatttgtta
ggcgggcctatatacactataaattag
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