Clostridium sp. BNL1100: Clo1100_1002
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Entry
Clo1100_1002 CDS
T01708
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clb03019
]
Clo1100_1002
03009 Ribosome biogenesis [BR:
clb03009
]
Clo1100_1002
Messenger RNA biogenesis [BR:
clb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Clo1100_1002
Ribosome biogenesis [BR:
clb03009
]
Prokaryotic type
rRNA processing factors
Clo1100_1002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AEY65256
UniProt:
H2JDS7
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All DBs
Position
1191760..1193244
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AA seq
494 aa
AA seq
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MVNEIIVDVSPGEIRVGILEDKELAEIHIERTNHQGLVGNIYRGKVSSVLPGMQAAFIDI
GYEKNAFLYVGDAIPKKEYSDDETEVSSNYEEYNITDILKVGQEITVQVIKEPIGTKGPR
VSTHITLPGRNLVLLPNADYIGISRRIENDAERQKLKKIAEKLKPQNMGLIVRTVSEGKE
ESDFVEDVSFLLKLWAKIKESENKGPVPRCIHKDINLIYRSVRDLFTWDVNKFIINNEKE
YLKVLELVEMISPLLKSRVELFQKDYKIFDYYQIETKIERALSRKVWLKCGGYIIIDKTE
ALTVIDVNTGKFVGESNLEETVLKTNVEATREIAKQLRLRDIGGIVIIDFIDMNNPEHQQ
LVLDSLKHSLKSDRTKTIVLGMTELGLVEMTRKKIRQELSTVMSCDCPVCDGAGRVYTGE
TNAMNILREVREHMNCTSAKKFKLEVHPTVAPVIEDNIERLSKEFVENKDKKVKVTAVND
IRPAGYRIKDIDMD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgagattatagtagatgttagtccgggtgaaataagagttggtattctggaa
gataaggaactggctgagattcatatagaaagaacaaatcatcaggggcttgtgggtaac
atatacaggggaaaagtaagcagtgtgcttccgggtatgcaggccgcctttatcgatatc
ggatatgaaaaaaacgcatttttgtatgtgggtgatgccattcccaaaaaagaatattcc
gatgatgaaacagaggtttccagtaactacgaagaatataatattaccgatatcctcaaa
gtaggacaggagataacggtgcaggttataaaagaacctattggcacaaagggccctagg
gtttcaacgcatataactttacctggaagaaaccttgttttgctgccaaatgcagattat
atagggatatcccgaaggattgaaaacgatgcggaaaggcagaagctaaagaaaatagcc
gaaaaactaaagccgcaaaacatggggttaattgttagaaccgtttctgagggaaaagaa
gaatctgactttgtagaggatgtttctttccttttgaagctttgggcaaaaataaaggaa
agtgaaaataaaggccctgtaccaaggtgtatccacaaagatataaaccttatatacagg
tcagtcagagatttgttcacatgggatgtaaataaatttattataaacaatgagaaagag
tacttaaaagtacttgaacttgttgaaatgatatccccactcctcaaaagcagagtagaa
ctgtttcagaaggattacaagatttttgattactaccagatagaaacgaaaattgagcgt
gctctatccagaaaggtatggctaaaatgcggtgggtatataattatcgacaaaaccgag
gctctcactgtaattgatgtcaatacaggcaagtttgtaggagagagtaatctcgaggaa
acagtacttaaaactaatgttgaagcaacaagagagatagcaaaacagcttcgacttaga
gacattggcggtattgtaataatagattttattgacatgaacaaccccgaacatcagcaa
ctggtattggattctcttaaacatagcttaaagagtgatagaacaaagacaatagtactg
ggtatgacagagcttggcttggttgagatgaccagaaaaaagataaggcaggagctgtca
accgttatgagctgtgattgtcctgtatgcgatggagcaggaagagtttataccggggaa
accaatgctatgaatatactcagggaggtaagggagcatatgaattgtacatctgcaaag
aaatttaagctggaagtacaccctaccgtagctcctgtaattgaagataatatcgaaaga
ctctcaaaggaatttgtggagaataaggataaaaaagtaaaggttactgccgtcaatgat
ataagacccgcaggctatagaattaaagacattgacatggattag
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