Clostridium sp. BNL1100: Clo1100_1103
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Entry
Clo1100_1103 CDS
T01708
Name
(GenBank) type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clb03032
]
Clo1100_1103
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_1103
Enzymes [BR:
clb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Clo1100_1103
DNA replication proteins [BR:
clb03032
]
Prokaryotic type
DNA Topoisomerases
Clo1100_1103
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clo1100_1103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AEY65355
UniProt:
H2JE97
LinkDB
All DBs
Position
1301671..1303653
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AA seq
660 aa
AA seq
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MTKDNRKNEYGNESISSLKGADRVRLRPGVIFGSDGLDGCEHSFFEILSNSIDEAREGHG
NVIEVTRFADKSIMVQDWGRGLPVDYNTKEERFNWELVYCELYAGGKYQNNSGENYEYSL
GLNGLGACATQYSSEYFDVTVFRDGYRYDLHFEKGENVGGLKKEKCKCDKTSTIQKWRPD
IDVFTEIDIPLEHYQTVLKKQAVVNAGLKFILKDEESGETFIYLYENGIVDYVKEITKDT
GFTEIQYYEGSAKGRDREDKPEYKVKMQFAFCFNNQTNLLEYYHNSSFLEYGGAPDKAVK
NALIYEIDKSIKTRGKYNKDESKITFADIEDSLILVVNSFSTITSYENQTKKSITNKFIQ
EAMTDFLKQQLEIYFIENKIESDKIIEQILVNKRSRETAEKTRINIKKKLSGNVDISNRV
KKFVDCRTKDITKREIYIVEGDSALGACKLGRDAEFQAIMPVRGKILNCLKAEYDSIFKN
EIIVDLLKVLGCGVEIKSKHNKDLNTFDLANLRWDKVIICTDADVDGFQIRTLILTMLYR
LVPTLLSEGKVFIAESPLFEITCKNKSYFAYTEKEKAEILTKLEGNKYTIQRSKGLGENE
PEMMWQTTMNPASRRLIKVMPSDVEKTSMMFDVLLGDNLAGRKQFIEDNGSKYLDMIDVS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggataatagaaagaatgaatatgggaatgagagtatttcatcgctcaaagga
gctgacagggtaagacttcgcccgggtgttatattcggttcggacgggttggacggctgt
gaacattctttctttgaaattttgtcaaactcaatagacgaggccagagaaggccatgga
aatgtaatagaagttacaaggtttgcagacaaatcaataatggttcaggactggggaaga
ggtttgcctgtagattacaacacaaaagaagaacgtttcaattgggagctggtttattgc
gaactgtacgcaggaggaaagtatcagaacaactcaggcgaaaactatgagtacagtctt
ggattaaacggacttggagcatgtgcaacccaatacagctcggaatattttgatgttact
gttttccgtgacggatacaggtacgaccttcactttgaaaagggtgaaaatgtcggaggc
ctgaaaaaagagaaatgtaaatgtgacaaaacgtctacaattcaaaaatggagaccggat
atagatgttttcactgaaatagatatccctctggaacattatcagacggtattaaaaaaa
caggcagtagtcaatgcagggcttaaatttattctaaaggatgaagaatcaggagaaacc
tttatatacctttatgaaaacggaatagttgactatgtaaaagaaataacaaaagataca
ggttttactgaaattcagtattatgaaggttctgcaaagggcagggatagagaggacaaa
ccggaatacaaggtaaagatgcagtttgccttctgttttaacaatcaaaccaacctttta
gaatactatcacaattcaagttttcttgagtatggaggtgcccctgacaaggctgtgaaa
aatgcattgatatatgaaattgacaagtccataaagacaaggggaaagtataacaaggat
gagtcaaaaataacctttgcggacattgaggatagtcttatactggttgttaattctttt
tcaacaataaccagctatgagaaccagacaaagaaatctataactaacaagtttattcag
gaagccatgactgatttcctcaagcagcaactggagatttactttatagaaaataagatt
gagagtgataaaattatagagcagattctggttaacaaaaggagcagggaaactgccgaa
aagaccagaatcaatataaaaaagaagcttagcggcaatgtagacatttccaacagagta
aagaaatttgttgactgccgtacaaaggacataaccaaaagagaaatctatatagttgag
ggagattctgcacttggagcttgtaaactgggcagagatgcggagtttcaggcaatcatg
cctgtaaggggaaaaattctcaattgtcttaaagctgagtatgacagcatattcaaaaat
gaaattattgtagaccttcttaaggtactgggctgtggtgtcgagataaaatcaaagcat
aacaaggatttaaacaccttcgacctggcaaatctcaggtgggacaaggtaattatatgc
accgatgcagatgtggacggcttccaaatcagaactcttatattgactatgctttataga
cttgtccctacacttttaagcgaaggaaaagtatttatagccgagtcacccttgtttgag
ataacctgtaaaaacaaatcctactttgcttatacggaaaaggaaaaggctgaaattctg
acaaagcttgagggcaacaaatatacaatacagcgttcaaaaggacttggagaaaatgag
ccggaaatgatgtggcagacaactatgaaccctgcttcaagacggttgataaaggtaatg
ccaagtgatgtagagaaaacttctatgatgtttgacgtactgttgggagataacctggca
ggcagaaagcagtttatagaggataatggcagcaaatatcttgatatgatagatgtcagc
taa
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