Clostridium sp. BNL1100: Clo1100_1205
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Entry
Clo1100_1205 CDS
T01708
Name
(GenBank) MutS domain V
KO
K07456
DNA mismatch repair protein MutS2
Organism
clb
Clostridium sp. BNL1100
Pathway
clb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Clo1100_1205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_1205
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Clo1100_1205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
AEY65455
UniProt:
H2JF75
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Position
complement(1390345..1392312)
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AA seq
655 aa
AA seq
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MNKYAITLEFNKIIEMLIENTVSQKAKDKLSLLEPYMSESECKRRMKETTDSKRLLESLG
TPPLSSMNELDKILDLCAKGAMLIPEQFEEVSQFLLACRRMKSYLKRAESLENEIAYYGS
SIDALNDLCEEIEGSIRNGRVDDSASPKLKDIRRRKENAHQQIRSKLESILRGKKEWFAD
SFISMRNGHFVLPVRKEYKNMVSGTLIETSATGGTYFIEPSVVRRLQDDISTLAVEEENE
ERKILYTLTSLVDEHLPVFKTNVDIMETLDAFFAKAKLSVQMKATAADIHMKRRIVIKAG
RHPLLNQSECVPLDFEIGNEIRGVVITGPNTGGKTVALKTVGLLSTMAQSGLHVPANPGS
EFSMHNMILCDIGDGQSITENLSTFSAHITTINDILKQSTGESLVLLDEVGSGTDPAEGM
GIATAILEELKTKGCLFVATTHYPEIKDYAKNTAGLINARMAFDKESLKPLYKLEIGEAG
ESCALYIAKRLGFPAHLLSLAHDAAYKEYHSTKVIASENKEAFLSSIGQESQTQITPGLG
SPVLIKETPKKPVPQNRSSKFNIGDSVMVFPQKELGLVYQKANEYGEIGVQIKGQKKLIS
HKRIKLHVPASELYPPDYDFSIIFDTVENRKARHKMGKKHNPDLIIEYDNDKTDK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatgccataacacttgagtttaataaaataattgaaatgcttattgaaaat
accgtttcccagaaagctaaagataaactttcactgcttgaaccatatatgagtgaaagt
gaatgtaaaagaagaatgaaggaaaccacagattcaaagaggcttcttgaaagcttgggt
actcctcctctgtcttctatgaacgagcttgataaaattcttgatttatgtgcaaaggga
gcaatgcttattccagaacaatttgaggaggtctcacagtttcttctggcttgccgacgc
atgaaatcatatcttaaaagggctgaaagcctggagaatgaaattgcttattatggaagc
tcaattgatgcccttaatgacctttgtgaagaaattgagggttcaataagaaatggaagg
gttgatgattctgcatcaccgaaactgaaagatattcgcagaagaaaggaaaatgcccat
cagcaaatccgttccaagcttgaaagtattttaaggggtaaaaaggaatggtttgctgac
agttttatttctatgaggaacgggcatttcgtactgccagttagaaaagaatataagaac
atggtatccggtaccctgatagaaacctcggccacaggaggcacatattttatagagcct
tctgttgttcgcagacttcaggatgatatatcaacccttgctgttgaagaagaaaatgaa
gaaagaaaaatactatatactctgacctccttggtagatgaacatttacctgtgtttaaa
accaacgtagatattatggaaactttagatgccttttttgccaaggccaaactttctgtt
caaatgaaggcaactgcagctgacatccatatgaagcgtaggattgttattaaagccgga
cgacaccctcttctcaaccagtcggaatgtgtacctcttgactttgaaatcggtaatgaa
attagaggagttgttataacaggcccgaatacaggaggtaaaacagtggcccttaaaact
gtagggttgctttcaactatggcccaaagtggacttcatgtccctgccaatccgggaagt
gaattttcaatgcataatatgattttgtgtgatatcggtgacggtcaaagtattaccgaa
aatttatcaactttttcggcacacataacaaccattaatgatatcctaaagcaatccaca
ggagaaagcctcgtcctgctggatgaggtaggctcaggaactgatccggcagagggtatg
ggcatagctacggcaattctggaagaactaaaaaccaaaggctgcctgtttgtggcaact
actcattaccccgaaataaaggactatgccaaaaatacagccggtctaataaatgcaaga
atggcttttgacaaggagagtctaaaacctttatataaacttgaaattggcgaggctggg
gaaagctgtgctctgtatattgcaaaaaggctgggctttcctgcacatcttctcagtctt
gctcacgatgctgcctataaggagtaccactctaccaaggttattgcttcggaaaataaa
gaagcttttttgagctctattggacaggaaagtcaaactcaaattacaccaggcttaggc
tcgcctgtactaattaaggaaactccaaagaaacctgtgcctcaaaaccggagcagcaaa
tttaacataggagacagtgttatggtctttccccagaaagaattggggctggtctatcaa
aaagccaatgagtatggtgaaataggtgttcagattaaaggccaaaaaaagcttatctcc
cacaaaagaataaagctccacgtgcctgccagtgagctgtacccgcctgactacgatttt
tcaataatatttgatactgttgaaaatcgaaaagcaagacataagatgggaaaaaagcac
aatcctgacttgattatagagtatgacaatgataaaactgacaagtag
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