Clostridium sp. BNL1100: Clo1100_1245
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Entry
Clo1100_1245 CDS
T01708
Name
(GenBank) MutS2 family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
clb
Clostridium sp. BNL1100
Pathway
clb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Clo1100_1245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_1245
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Clo1100_1245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
ArlS_N
MCM3AP_GANP
AAA_22
Exonuc_VII_L
Spectrin_SESTD1
Motif
Other DBs
NCBI-ProteinID:
AEY65493
UniProt:
H2JFB3
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Position
1434149..1436527
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AA seq
792 aa
AA seq
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MNEKTQRVLEFYKIIDKLKGLTASELGRELVLELTPQTDLRAVEKMLSETNDGVSCVLKR
GSPPLGGITDIRMTLKRLDMGGVLSPGELLRLAGVLRAARRLKGYINDKLDENKTNVVNE
LISCLESNQRLEQKIENCILSEDEIADNASPALSSIRRQIKEQQASIKDKLNSIIRSTKY
QKFIQESVVTMRGDRYVIPVKQEHKGDIPGLVHDSSASGATLFIEPMAVVEANNSIKQLR
VKEQTEIDRILAELSQDASLILPQLNANMSIMARLDFIFAKAKLAVDYKCICPRINDTGK
IIIKKGRHPLLDPQKVIPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFTLMVQSGLLV
PANEGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLILLDELGAGT
DPTEGAALAMSILESLHQMGATTLATTHYSELKVYAISTTGVENASCEFDVETLRPTYRL
LIGVPGKSNAFAISKRLGLTDDIIERSKEFLSQEDIRFEDILLSIEKNRSEAEKEKMRAE
SYRQEAERLKKDLEDQKRRLAAQKESELRKAREEARRILTDSKHQADELVSEMKRLAKEQ
EEAEVRRQTEELRQRLNKSINNLDDSLVESIMPRQGLVKPPKNLKPGDTVLIVNLNQKGT
ILSLPDKNGEAQVQAGIMKINVHISNLKLVDEQKQQIQRTGMGKIGVSKAQNMSTEIDLR
GMMLSEAVDVVDKYLDDASIAGMGEVTLIHGKGTGALRAGLHQHLKHNPHIKSFRLGKLG
EGENGVTVVELN
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaaactcaaagagtacttgaattttataaaattattgataaattaaaaggc
ttgaccgcatctgaattggggagggagcttgttttagagctaactcctcaaactgattta
agggcggttgaaaaaatgctgtcagagaccaatgacggtgtaagttgtgtattgaaaagg
ggctcacctccccttggaggaataactgatatcaggatgacccttaaaaggcttgatatg
ggaggagtgcttagtccgggggaattactgcgccttgcaggagtactaagagccgccaga
aggctaaaaggatatattaacgataaactggacgaaaataaaaccaatgtggtcaatgaa
ctcatatcctgtcttgagtcaaatcagaggttggagcagaaaatcgagaactgtatatta
agcgaagatgagattgctgataacgcaagccctgcactaagcagtatcagacgccagatt
aaggagcagcaggcgtctattaaggataagctgaactccatcattcgttccacaaaatac
cagaagtttattcaagaatctgttgtaaccatgaggggggacaggtatgtaatcccggta
aaacaggagcataagggagatatacccggattggtgcatgattcttctgccagcggtgcc
acattgtttattgagccaatggcggttgttgaagcgaacaacagtataaaacagcttagg
gtgaaggagcaaacggagatagacaggatacttgccgagctgtctcaggatgcttctctg
atattgccgcaattaaatgcaaacatgagtataatggcaaggcttgattttatttttgca
aaggcaaaactggcagtagattataaatgtatttgtcctagaattaatgataccggcaaa
atcattataaaaaaaggaagacatcctcttctggatcctcaaaaagtaataccaattgat
ttctggatcggtgaaaaattcagttcattgattgttaccgggcctaatacagggggcaaa
acagtatcccttaaaacagtgggactgtttactttaatggtacagtcggggcttctggtt
cctgcaaatgagggaacggagatgagtgtgtttgaaaagatttatgcagacattggggac
gagcagagcattgaacaaagccttagtacattttcatcccatatgaagaatattgtggat
atacttagcggtgtcaacaacaagtcgctgatactgctggatgagctaggggcagggaca
gaccccacagaaggggcagctctggctatgtcaattcttgaatctctgcaccagatgggt
gctacaactctggcaacaacacactatagcgaactcaaggtttatgctatttctactaca
ggagttgaaaatgcatcctgcgaatttgacgtggaaacacttagacctacctacaggctt
cttataggtgtacccggaaagagcaatgcatttgccatttctaaaagacttggtctgaca
gatgacataatagaaaggtcaaaggagtttctgtctcaggaggacataaggtttgaggat
atactattaagtatagaaaagaaccgtagcgaggccgaaaaagagaaaatgcgtgccgaa
agctacagacaggaagcagaacgacttaaaaaggatttggaggatcagaaaagaagatta
gcagcacagaaggaaagcgaacttcgaaaggctcgtgaagaagcacgacggattctaaca
gattcaaaacatcaagcagacgaactggtttcagaaatgaaaagactggcaaaggagcag
gaggaggctgaagtacgaagacaaacagaggagcttcgtcaaagacttaacaagagtata
aacaatttggatgattctctggttgagtccataatgcctagacaggggctagtgaaaccg
cctaaaaatcttaaaccaggtgatactgtattaatagttaaccttaaccagaaaggaacg
attttatcactaccggataagaacggggaagcacaggttcaggctggaattatgaaaata
aatgttcatatttcaaacctcaaattagtagatgagcagaaacagcagatacaaagaacc
ggaatgggtaaaataggtgtttcgaaagcacagaatatgtcaactgaaattgatttgcgt
ggaatgatgctcagcgaggctgttgacgttgttgataagtacctcgatgatgcaagtatt
gcaggtatgggggaagtaacgcttatacacgggaaaggcaccggagctttgagagccgga
ctccatcagcacctgaagcataatcctcatataaaaagcttcagacttggtaaactgggt
gagggcgaaaacggtgttacagttgtggaacttaattaa
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