Clostridium sp. BNL1100: Clo1100_1375
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Entry
Clo1100_1375 CDS
T01708
Name
(GenBank) type IV secretory pathway, VirD4 component
Organism
clb
Clostridium sp. BNL1100
Pathway
clb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Clo1100_1375
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Glyco_transf_22
Motif
Other DBs
NCBI-ProteinID:
AEY65611
UniProt:
H2JGG8
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Position
1610130..1612421
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AA seq
763 aa
AA seq
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MHNRHLKVQYTTVFFVFIVLSVFCVFASMAFHKILIGADRAPTYYPIKECIESIRTVKKH
RLLFLCFEGLSFCLAASLMVSYSRNYISKLQCITPKIYTPVAAGQNQFGSARWMTEKEKA
KAFDTAVINHKDEFYKALLEAGKKDRAIIKKHVIDKEDKQEHKKLHFQYIKWFVGKVLPE
EKRHILREKLRLSYDEILKKYFPSIWQMKEQRNVDKLANLFECEFDVSKEADSNAEIKTD
SIETITNTQCFSSGGVVIGMKKLGGGKELFYYIGDDTHLLGIGATRSGKSRTMVIQSICF
LALAGESMIVSDLKGELNQYTGTFLKRLGYNVITLDFKNPLKSDRYNLLQPIIDAIDEDN
IPKATECVWDLVGILVGDAKGEKIWNNGEASTIACAIMSVVYDNREGERRKYQTLTNVYY
FIAEMCKPIGKNIPIVEYVKVLPDNHPAKPLVAISEIAPERTRGSFYTAALTTLKLFTSS
YINAMTMASDYNPKDLGRKKTALFMVLPDERTTYYSIASLLVLQHYIQLVNESDGRGGRL
KNRVNFILDEFGNFAAIPSFDTLLTVGGGRGMRFNLFLQDFAQLEIKYDEKVAKTIKGNC
QVWDYLQTNSPETLKEISEKLGNYTVSTYSLSSQSSKYQTPSSSASVNLTGRALLMTNEI
AQIDRPYSLVTSKENPAIMYSPDLSKWNFNTMLGLGNTKHNEKVRDYREKQRIERMTKKE
AEKIELWSECWKYWQKQCGGMLEQPLQQIPIRRTIARRDEDYY
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacagacatttgaaagtacagtacacaactgtattttttgtatttatagtactt
tcagtattttgtgtatttgcctcaatggcatttcataagatactgataggagctgacaga
gcaccaacatattaccctataaaagaatgtatcgaaagcataagaacagtcaaaaaacat
agactgctttttttatgctttgagggattatccttctgtctcgcagcgtcacttatggtc
agttacagcagaaactatattagcaagctacaatgtataactcccaagatatatacaccg
gtagccgcagggcagaaccagttcggatctgccaggtggatgactgaaaaggaaaaagca
aaagcctttgataccgctgttataaatcataaagatgaattttataaagctttgttagag
gctggtaaaaaggatagggcaataataaaaaagcatgttatcgacaaggaagataaacag
gagcataagaagttacattttcagtatattaaatggtttgtgggtaaggtactgccggaa
gaaaaaaggcatatactcagagaaaaactcagactatcttatgatgaaatacttaaaaaa
tacttcccaagtatatggcaaatgaaggagcaacgaaatgttgataagctagccaattta
tttgaatgtgaatttgatgtttcaaaagaggcagattcaaacgctgaaataaaaacagat
agtatagaaacgattaccaatactcaatgcttcagttctgggggagtggttattggaatg
aaaaagcttggtggaggaaaggagctgttctattatattggtgacgatactcatttgctt
ggaataggtgcaacccgttcaggtaaaagcagaactatggtaatacaaagtatttgtttt
ttagctctggcaggagaaagtatgattgtatccgatttaaagggagaactgaaccaatat
accggaactttcttgaaaaggttgggatacaacgttataaccctagacttcaaaaatcct
ttaaaaagcgataggtataacctactacagccaataattgatgccatagatgaagacaac
atacccaaagctacggagtgtgtatgggacttagtcggtatcctggttggagatgctaaa
ggcgaaaagatatggaacaacggtgaagcttcaacaatagcctgtgccataatgtcagtt
gtatatgacaacagagagggcgaacggagaaagtatcagaccttgaccaatgtgtattac
ttcatagctgaaatgtgcaagcccattggaaagaacatccccatagtcgaatacgtaaaa
gtattaccggacaatcatcctgccaaaccgttggtagccatatctgaaatagctcctgag
agaacaaggggaagcttttatactgcggcacttactacacttaaactctttacatcaagc
tacataaacgcaatgaccatggccagtgactacaatccaaaagacctcggcagaaaaaag
acagcactgtttatggttcttccggacgaacgtacaacatattacagcattgcatcatta
cttgtcctgcagcattacattcagttggtaaatgaaagtgatggcaggggaggacgtctc
aaaaacagagtaaattttatacttgatgaatttggaaactttgctgccataccttccttt
gacactttacttacagtcggcggaggcagaggaatgagattcaatttattccttcaggac
tttgctcagttggaaatcaagtacgatgaaaaggttgccaaaacaataaaaggaaattgt
caggtatgggattacttgcagacaaactctcctgaaactcttaaagaaatatcagaaaag
cttggaaactacacagtatcaacctattcactatccagtcaaagcagtaaataccaaacg
ccttcatcatcagcaagtgtaaatctgacaggaagagcattgctaatgacaaacgaaata
gctcagattgacagaccatacagcctagttacatccaaggaaaacccggcaataatgtat
tccccggatttgtcaaaatggaacttcaacacaatgcttggccttggcaatacgaaacac
aacgaaaaggtaagagactacagagaaaaacaaagaatcgaaagaatgactaaaaaggaa
gctgaaaaaatagagctttggagcgagtgttggaagtattggcagaaacaatgcggaggg
atgctggaacagccgctgcagcagattcctataagaaggactattgcaaggagggatgag
gattattattag
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