KEGG   Clostridium sp. BNL1100: Clo1100_1788
Entry
Clo1100_1788      CDS       T01708                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
clb  Clostridium sp. BNL1100
Pathway
clb02024  Quorum sensing
clb03060  Protein export
clb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:clb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Clo1100_1788
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Clo1100_1788
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Clo1100_1788
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:clb02044]
    Clo1100_1788
Enzymes [BR:clb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Clo1100_1788
Secretion system [BR:clb02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Clo1100_1788
  Eukaryotic Sec-SRP protein
   Clo1100_1788
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_30 Zeta_toxin CbiA AAA_22 AAA_31 AAA_17 CLP1_P cobW APS_kinase SRPRB AAA_16 PIF1 ParA AAA_33 PDE8A_N NPHP3_N Thymidylate_kin ATP_bind_1 MMR_HSR1 AAA_18 ResIII TctA
Other DBs
NCBI-ProteinID: AEY65998
UniProt: H2JJM4
LinkDB
Position
2063618..2064964
AA seq 448 aa
MSVFEGLSGKLQETIKKIRGQGRVSEKDVKDMMREIKLALLEADVNFKVVKEFISKVSER
AVGSDVLESLTPGQQVVKIVHEELIELLGREQSKVTFAPKPPTIFMMAGLQGAGKTTTAG
KLANLLRKQGKNPLLVACDVYRPAAIKQLQVLGNQLNIPVFTLENNQNPVQIAKEAVSFA
EMKQHDLVIIDTAGRLHIDEKLMDELLNIKNSVKPHEILLVVDSMTGQDAVNVSETFNEK
LGIDGVVLTKLDGDTRGGAALSVKSVTGKPIKFAAMGEKLNDIEPFFPDRMASRILGMGD
VLSLIEKAQEAYDEKKAIELEKKMRTMTFTLEDFLDQMQQIKKMGPIGDLLGMMPGVDSK
ALKDIDIDEKQMGRTEAIIQSMTRKERLDPSIINGSRRKRISAGSGTTIQEVNALLKQFE
QMKKMMKMMSDMGKKGKKGGLGKFKMPF
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtcagtttttgagggtttgtcaggaaagctccaggaaacaataaagaaaattcgcgga
cagggcagagtatccgaaaaagatgtaaaggatatgatgagagaaatcaagctggctctg
cttgaagccgatgtaaactttaaggttgttaaagaatttataagcaaagtatctgaaaga
gcggtaggttctgatgtattagagagccttacaccgggacagcaggtagttaagatagtt
catgaagaactgatagaattgctcggcagggagcaaagtaaggttacatttgcaccaaaa
cctccgacaatttttatgatggcagggcttcagggtgcaggtaaaaccactacggcggga
aaacttgcaaatcttttgagaaaacagggtaaaaaccctttgcttgttgcttgtgacgta
tatcgtccggcagctataaagcagctccaggtattgggaaatcagttgaatattcctgta
tttacactggagaacaatcagaatcctgtgcaaatagctaaagaagcagttagctttgca
gaaatgaaacagcatgatctggttataattgatacggcgggaagactccatattgacgaa
aagcttatggatgaactgttaaatataaagaattcagttaaacctcacgaaatacttttg
gttgttgactcaatgacaggtcaggatgcggtaaacgtgtctgaaacctttaatgaaaag
ctgggtattgacggagtagtccttacgaagcttgatggtgatacaagaggtggtgctgct
ctttctgttaaatctgttacaggtaagcccataaaatttgctgcaatgggtgaaaagctc
aacgatattgagccgtttttccctgacagaatggcatccagaatacttggaatgggcgat
gttctcagtctcatagaaaaagctcaggaagcatatgacgagaaaaaggctattgaactg
gaaaagaaaatgcgtaccatgacgtttacgctggaggattttctagatcagatgcagcaa
ataaagaaaatgggacctatcggcgatttgcttggcatgatgccgggtgtggactcaaag
gctttgaaggacatagatattgatgaaaagcagatgggacgtacggaagctattatccag
tcaatgacaagaaaagaaagactggatccgtcaattataaacggaagccgcaggaaaaga
atttctgccggaagcggtactaccatacaggaagtaaatgcactcttaaagcagtttgaa
cagatgaagaaaatgatgaaaatgatgagtgacatgggcaagaaaggtaaaaaaggcggg
cttggaaagtttaagatgcctttttga

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