Clostridium sp. BNL1100: Clo1100_2416
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Entry
Clo1100_2416 CDS
T01708
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clb03032
]
Clo1100_2416
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_2416
Enzymes [BR:
clb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Clo1100_2416
DNA replication proteins [BR:
clb03032
]
Prokaryotic type
DNA Topoisomerases
Clo1100_2416
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Clo1100_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DNA_ligase_ZBD
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
AEY66588
UniProt:
H2JEV0
LinkDB
All DBs
Position
complement(2747739..2749859)
Genome browser
AA seq
706 aa
AA seq
DB search
MADNLVIVESPGKVKSISKFLGKGYKVEASVGHVRDLPKSQMGVDIDNDFEPKYITIRGK
GDVISKLKKEAKAAKKVFLATDPDREGEAISWHLAKILNIDEKQKCRVSFNEITQNAVKN
AVKQPRTIDMGLVDAQQARRVLDRIVGYKISPLLWKKVKKGLSAGRVQSVATKMICDRED
EIENFESQEYWSITAKLTKPKASPNFEARFYGIGKEKIELTNEEQVNSILDEINKSQYIV
QKVKEQEKKRAAAAPFITSTLQQEASRKLGFTTKRTMMVAQQLYEGIEIKGHGSVGLITY
MRTDSTRISTDAQNEAREYIKTKYGQDYIPENPRVYKNKSASQDAHEAIRPTYMDMAPEG
LKEFLSAEQYKLYKLIWDRFISSQMSSAIYDTVAADITAGKYMFKANGSKVKFPGFMVLY
IEGNDVEGKDEDGEQNEKENNLPQLNEGDILELKKNTPKQHFTQPPARYTEATLVRALEE
KGIGRPSTYAPTITTILSRGYVLKEKKLLVPTELGKIVNDIMKNHFENIVDTKFTAQMES
ELDDVEDGNKEWKAVMRDFYSSFAGVLKEAEESIGDVELPVEVSDVQCDKCGRYMVVKHG
RFGKFLACPGFPECRNTKPIVEEAGVECPLCKGKVLIKKTKKGKKYIGCERNPECSFMSW
DMPSPNKEMCPVCGAFMLQKSSGKKKALKCSNDKCTSNTETSTDTK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgataacctggttattgtggagtctcccggaaaagttaaatctataagcaaattt
ttaggtaagggatataaggtagaggcttctgtcgggcatgttagggatttacctaaaagt
cagatgggtgttgatattgataatgattttgagcccaagtatattactataagaggcaag
ggcgatgttatatcaaagctgaaaaaagaagccaaggcagcaaaaaaagtgtttcttgca
actgaccctgaccgtgaaggtgaggcgatatcctggcacttggccaaaatattaaatatt
gatgaaaagcagaagtgtagggtttcatttaatgaaataacacaaaatgcggtaaagaat
gctgtaaaacagccaagaacaatagatatgggccttgttgatgcacagcaggcaagaaga
gtactggacagaatagtaggctataagataagccctctgctttggaagaaagtaaaaaaa
ggcttgagtgcaggaagagtacaatctgtagctacaaaaatgatttgcgacagagaagat
gaaatagaaaattttgagtcacaggaatattggtcaataacggcaaagcttacaaaacca
aaagcaagtccgaattttgaagcaagattctatggcataggcaaggaaaaaattgaatta
acaaatgaggaacaggttaattccattttagatgaaataaataaaagccaatatattgtg
caaaaggttaaagaacaggaaaagaaaagggcagctgcagcaccttttattaccagtaca
ttacagcaggaagcttccagaaaactgggatttacaaccaagaggaccatgatggttgca
cagcagctatacgaaggtattgaaataaagggtcatggctctgtcggtcttataacctat
atgagaacagactcaacaaggatatcaacagatgcacagaacgaggccagagagtatatt
aagacaaagtatggacaggattatatacctgaaaatccaagggtatataaaaacaaatca
gcttctcaggatgcccacgaagcaatacgtccaacatatatggatatggcacctgaggga
ctaaaggaatttcttagtgctgaacaatacaagctctacaagcttatctgggacagattt
atatcaagtcagatgtcatctgccatatacgacactgtagcagctgatattaccgcaggg
aaatacatgttcaaagcgaatggatcaaaagtaaaatttccgggattcatggtattgtat
attgaagggaatgacgttgaaggcaaggatgaagatggggagcagaatgaaaaggaaaac
aacctgcctcagctgaatgaaggagatattcttgaattgaaaaagaatacgccaaagcag
cattttacgcaacctcctgccagatacaccgaggcaacccttgtaagggctttggaagaa
aaagggataggaagacctagtacctatgcccctacaattacaactattttatcccgtggg
tatgttctaaaggaaaagaagttgttggtaccgacagaacttgggaaaatagtaaatgac
ataatgaagaaccatttcgagaacattgttgatacaaaatttactgctcagatggaaagc
gaactggatgatgtcgaagatggtaacaaagaatggaaggccgtaatgagggatttttat
tcttcatttgcaggagtacttaaagaggccgaagaatcaataggcgatgttgaattacct
gtagaggtatcagacgtacaatgtgataagtgtggaaggtatatggttgttaaacatgga
agattcggtaaatttcttgcttgtcccgggtttccagaatgtagaaatacaaaaccgatt
gtagaagaggctggggtggaatgtcctctttgcaagggaaaggtactcattaaaaagact
aaaaaaggtaaaaagtatatcggttgtgagagaaatccggaatgttcgtttatgagctgg
gatatgccgagtccaaataaggaaatgtgtcctgtttgtggagcatttatgcttcaaaaa
tcctccggtaaaaagaaggctcttaaatgcagcaatgacaagtgtaccagtaatacggaa
acctcaacagatactaaataa
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