Clostridium sp. BNL1100: Clo1100_2472
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Entry
Clo1100_2472 CDS
T01708
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
clb
Clostridium sp. BNL1100
Pathway
clb03030
DNA replication
clb03410
Base excision repair
clb03420
Nucleotide excision repair
clb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Clo1100_2472
03410 Base excision repair
Clo1100_2472
03420 Nucleotide excision repair
Clo1100_2472
03440 Homologous recombination
Clo1100_2472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clb03032
]
Clo1100_2472
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_2472
Enzymes [BR:
clb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Clo1100_2472
DNA replication proteins [BR:
clb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Clo1100_2472
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Clo1100_2472
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clo1100_2472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AEY66641
UniProt:
H2JFE7
LinkDB
All DBs
Position
complement(2802740..2805430)
Genome browser
AA seq
896 aa
AA seq
DB search
MNSEDKILVVDGNSILNRAFYGLSRAAMLTTSEGLYTNAVFGFINILSKYLQDENPKYVC
VAFDLKAPTFRHKEYDQYKAQRKGMPNELAVQVPIIKQVLDAMNIARVEVEGFEADDILG
TVSLNAEKQGMETILLTGDRDSLQLASSHTRIKLPVTRGNKTETDQYDYEKVIEKYGVTP
GQLIDVKGLMGDTSDNIPGVPGIGEKTAIDLINKFNSLEELYENLDKVEKKGVREKLENN
KELAFMSKRLATIYRKVPGVENLSSFARTEIDKEALYGIFKRLEFKTLIEKFGLENTPFV
EATEALKIEHVDVDSISELQSYISVIKLSGNVSVYYHVDPTGSYLDDLCIFACNEEYAPA
NIIFSEKLTCETAVKELREIFESKDIEKYGHDLKNLYKYLKSSGIELENVVFDTFIAAYI
LEPTRSTYTISELSEDKLKQSITPVEVLYDKHGKRLDQEQDISSSEVCAAAVNAIFGLTQ
KLRPIIRDNGQDELYYKIELPLVEVLADMELRGFKVDVEGLKAYSKEMDSRLVILENEIY
MQAGETFNINSPKQLGVILFEKLGLPVGKKTKTGYSTSAEVLEQLSYKHEIVERILEYRQ
LMKLKSTYADGLLSVLEQDGKIHSNFNQTVTATGRISSTEPNLQNIPVKLEMGRKIRKVF
IPTNQDYVLLDADYSQIELRVLAHITDDPNMIEAFLKNEDIHTTTASKVFGIPPEEVSSL
MRSRAKAVNFGIVYGIGDFSLSKDIGVTKKEARQYIDDYLDKYSKVKEYMSDTVEKGKEF
GFVTTLYSRRRYLPELKSSNFNMRSFGERVAMNTPIQGSAADIIKISMVKVYNELKKRKL
KSKLILQVHDELIVETEKSELEEVSKVLKDCMENAVQLKVPLTVDVKHGDSWYETK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggaagacaaaattttagttgtagacggtaacagtatacttaacagagctttt
tacggacttagcagagcagccatgcttacaacgtccgagggattatatacaaatgcggtt
tttgggttcataaatatactttcaaaatatcttcaggatgaaaacccaaagtatgtttgc
gtagcctttgatctaaaagcccctaccttcaggcataaggagtatgatcaatacaaggcc
caaagaaagggaatgccaaatgagttggcagttcaggttcccatcataaaacaggttttg
gatgctatgaacattgcaagagtcgaagtggaagggtttgaagctgacgatatactggga
actgtttctttgaatgctgaaaagcagggaatggaaacgatactattaaccggcgacagg
gattcattacagctggcatcaagccatacaagaataaaacttcctgtaacaagaggaaat
aaaaccgaaacagatcaatacgattatgaaaaggttatagagaaatacggtgtaacaccg
ggccagcttatagacgtaaaggggcttatgggtgatacctcggacaatatccccggagta
cccggtataggtgaaaaaactgcaattgatctaattaataagtttaactctttagaagaa
ttatatgaaaatttagataaagtagagaagaagggcgtccgtgaaaaactggagaataac
aaagagcttgcttttatgagtaaaaggctggctactatatacagaaaagttcccggtgta
gagaacctaagtagttttgcaagaacagaaattgacaaagaagcattatatggtatcttc
aaacggctggaatttaagacccttatagaaaagttcggtctggaaaatactccttttgta
gaagcaactgaagctttaaaaattgaacatgtggatgttgattccataagtgaactacaa
tcatatataagtgtaatcaagctcagtggtaatgtatctgtgtattatcacgttgatcct
acaggcagttatctggatgatctgtgtatttttgcctgtaatgaggaatacgctcctgca
aatatcattttctcagaaaaattaacctgtgaaacggctgttaaagaacttcgtgaaatt
tttgaaagcaaggatattgaaaaatacggacatgatttaaaaaatttatacaagtatctc
aaatctagtggaatagagcttgaaaatgtagtatttgatacttttatagcagcatatata
cttgaacctacaagaagcacttacacaatttctgagctgtctgaagataaactaaaacaa
agtatcacccccgttgaagttttgtatgataaacatggcaaaagacttgatcaggaacag
gatataagttcatctgaggtttgtgctgcggcggtaaatgccatatttgggctgacacag
aagctgaggcctattataagggataacggtcaggatgaactttattataaaatagaactc
cctctagttgaggtactggctgatatggagctaaggggtttcaaagttgacgtggaaggc
ctgaaagcatattcaaaggaaatggattcaagacttgtaatactggaaaatgaaatatac
atgcaggcaggagagacctttaatattaattctccaaaacagctgggtgtaatacttttt
gaaaaattgggactgcctgttggaaagaaaacgaaaacaggatattcaacaagtgcagag
gtactagaacagctttcctataagcatgagatagtagaaagaattcttgaatacagacag
ttgatgaaactcaagtcaacatatgccgatggacttttgtccgtattggagcaggatggt
aagattcattcaaactttaaccagacagtgacggcaaccggaagaatcagcagtacggag
ccaaatctacaaaatatacctgtgaagctggaaatgggaaggaaaatacgaaaggtattt
attccgaccaaccaagattatgtactgctggatgccgactattcacagatagaactaaga
gtacttgcacatataacagatgatccgaatatgatagaagcctttttaaaaaacgaggac
attcatactactactgcttcaaaggtatttggaatacctccggaagaggtatcatcgtta
atgaggtcaagggcgaaagccgttaattttggaatagtttacggaataggggatttcagc
ctttcaaaagatattggggtaacaaaaaaggaagctcgacaatatatagatgactatctt
gataagtattccaaggttaaggaatacatgagtgatactgttgaaaaaggcaaagaattt
gggtttgtgacaactctttacagcagaagaaggtatcttcctgagcttaaatccagtaat
tttaacatgcgttcctttggagagcgtgttgcaatgaatacgcctattcagggaagtgcg
gcagatattatcaaaatatcaatggtaaaggtttataatgaattgaaaaagagaaagctt
aagtcgaaacttattctacaggttcatgatgaattgattgtggaaacagagaaatctgaa
ttggaagaggtatcaaaagtgttaaaggattgtatggaaaatgccgtacaattaaaagta
cctttaacagtagatgtaaaacatggggatagttggtatgaaacaaaatag
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