Clostridium sp. BNL1100: Clo1100_2559
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Entry
Clo1100_2559 CDS
T01708
Name
(GenBank) RHS repeat-associated core domain protein
Organism
clb
Clostridium sp. BNL1100
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Peptidase_S8
DUF6531
Motif
Other DBs
NCBI-ProteinID:
AEY66725
UniProt:
H2JG18
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All DBs
Position
complement(2900361..2908637)
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AA seq
2758 aa
AA seq
DB search
MKNKIRIAISRILVMAFFITNILVYLPSLSFAAGNSNEKADKQTAAMVHHEKTEILVKYK
SSSNQDKVKNNLKKKVKLKKLNLKKKYEKSKIDLLEIDAKDDISQVVDELKKDPDVLYAQ
PNYKLDIMSAPSAPMFEHQWGLQNNGQETEAQLGRSGVDINAINAWNLTQGSSSVVVGLL
DTGVDISHNDLKDNIFVNAKEIPGNGIDDDNNGYIDDIKGWDFVNSDNTVFDDATLDFHG
THVAGIIAAEANSEGICGIAPKVKVLPLKFINGNWGYTCDAIDAIEYAMKMGVKIINCSF
GGTDDNFALKDTMANSGILFICAAGNRGADVAVSPVYPACFDIPNVLSVASIDSKGVLSP
YSSYGNKIHVAAPGVNILSTTPGNSYDYFTGTSAAVPFVTGIAALLQSYVPNLTITQISQ
RIKENVVSCTNLSGKVSSGGRVDAYAALTNTKPEPDTYDGPGNDNSTVPAGQQGGNIDTW
YTMDQLAKIKEKLHYGESGVNPASGNFSVTVNDMSVPAPGFQVNISRTYNSRSDVSKEFG
RGWTFGFTGRVEGTEVVDVSLPNGSIERFRLNGNVYEPEESRSKFVKNADGTYTLTTPDQ
YKYTFNTNRYLVKMEDRNGNSINITVDGSGKITKITDTVGRAFTVSYGANGLVQKITDPE
NRTVAYEYDANNRLSVVTDPMGGKMRYFYDTWGYLNQIQDHNQKIVEKITYNHAEGENQH
KVSEATDSLGDTVKYAYDMTNKKTTITDINGRVSSYWFDSSFFTTRIQEPDGKSSYTEYF
QIGGKNKYGDVKSQTDRNGNKTQYEIDDRGNVTKIINPDGSTQLKEYDEKNNVTKEVDEC
GKTTYNLYDENKINLIKKVQPLNGLDVYDGTSNTGFAITSYQYYTGEESGSSAKGLLKSE
TDPEGNTTTYTYNTYGDVKTISDPETGKVTTYEYNRIGWKTAQITPKGNKTEFAYDKNGQ
LIKTRTVSSKNETQRTVYDLLGRKIQEITPNQYDSTKDNIEADTYTDNTVGTRYEYFDSG
KIKEQTNAIGDKTSYTYDVYGNTLTETKPNGAIYKYEYDVLDRPLKIYFRDNSSVAEVLL
TQYSYTTLEDGKTQKTETKYLNSKDKAVTVYTYDFADRLVEQQNPDGTRLRTIYNANGTI
NRQIAANGSSTYFKYDGLNRLTEQWTPFEVSNGNTLYTYNKTEYDKAGRKSAVESGKDKV
TLWSIPDSLAITNYQYYKNGNVSQTNDSEGRKTEYLYDDDGNVVRESIYTDTTNKLVTDY
AYNYLGNLEKKEQHVKTGDLYGKDFDDTTDTVLTTSYTYDKNGNTKTVTAPNKVTTTFEY
DVLDRQLSQSEPGVDEKGEAVTITNSTTYDWAGNPLTKTDAKGGITKYEYNQRGLLIKVT
DAQNGVTAYDYDLAGRKIAEVTPKNYDSTKSIYDLNRVEYVYDEMDRVLVKKDIYIDPVT
NQWVTIYTKTCKYDNSGNLIKELDAAGYDSGVGTTPGEKINSGYGTEYTYNLANLVITSK
DPVAKEHDLAFTSRYEYDGLARKISETNANKVETRYTYNDAGDILSVSLKKNASSTPKVV
KHSTYDLAGRILAQTDGNGNITTFEYNSLGKVRKTVAPGDSTIPSIMVTSQYDEMGQLKQ
QLNSMGKVDLYTYDNQGRQLSHTEKKSDNTQAITTYSTYDINGNKFSETDGNGNAKTYKY
DSLNRLLAVETTVGGREKTTTCTYDANGNKTSETDWLGNTSTNVYDPLNRLVEKRDPYTT
IQKLEYNKNSKQIKSTDALGNETRYIFDKNNRLIATIDPEGHTTSQSYDDVGNIIAKTSG
RNITTTYRFDEFNWLAEVINPKSEKTTYTYDLNGNKLTQTDGNGNTTSYEYNAANKVIRK
IDQGGRIGTPGKYTYLDAKTEKYTYFADGNMETKTDRNGKQTVYSYDIHGRLTRKAIGEA
AIGYTYDNNDNQLTITDKTGTTARTYDEENRVITKKAPGFGTTTYTYDNTEGGGLYFETA
EDFKHNLTKKVYDKAGRLYEVISDGKTTTYEYYGNGSRKTVTYSDGAKEEYTYYKDGLNK
TLTNKKADGTVIDTYSYTYDEAHNQTSKTDRKGTTSYNYDSLNRLEKVTEPNGRTTNYTF
DKAGNRLTETILAGATSVTTTYTYNEQNRLVSTVKRSGTETITDTYRFDNNGNTVSKTTE
TVKPVATSTSGGFSLEKSGKSTASNVTYYKFDVWNQLIKTTAGKKTATYSYNGEGYRVSK
TENERTTNYLYEADKVVLETDVEGNETARNIYGTNLLTRTAQNDTMNYMYNGHGDVTALV
GENGAIQATYYYDAFGNITEQTGDVNNNITYAGYQYDKETDLYYLNARYYDSKTARFLSE
DTYTGDPNDPLSLNLYTYCVNNPITYSDPTGHWQESDKNLIQSARIAISQLTDIYVTTSD
PEIKKACAAQAAAIRGCSDNIATTPQYSEVGMLYDQQLKKDGYVSASDWLKISNTYKKES
TQSAINGLKITESPYVPSTYKNQAIKATMNTVTAGVKKSTTQTKPQVSSSPSPRITNNGS
TVNGTGNSTKSLFLNSDFNLNPEIQQMISYYDDMYLYAKVAYDNKIIKDFEYNALSKLCE
EKAQNLRDDNKINTDDSFAYEVICGLGGFIPYAGVIFDVLGDAQPVYAADLSSVAIEKIS
DAKNMAVITSAISSNVNIKHTIYTLVDETTGEVKYVGRTRNPATRRIAHSLSSDKGNLVF
KAVEGWTDLSYNEARAAEQILFEQYGGLDKLKNKINPMSAKKFSKYVDYAWDVLKKLK
NT seq
8277 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaataaaatacgaatcgcaatatccagaattcttgttatggcctttttcataaca
aatatacttgtatatttaccgtcgctaagctttgcagcaggaaatagtaatgaaaaagct
gataaacaaactgctgctatggttcaccatgaaaaaactgaaattctggttaaatataaa
agcagctcaaatcaggacaaggttaaaaataacctgaaaaagaaagtaaagctcaagaag
ctgaatttaaaaaagaaatatgaaaaaagtaagattgacctactggagatagacgcaaag
gatgatatatcccaagtagttgacgagttaaaaaaagaccctgatgttttgtatgcacag
ccaaactacaaactcgacatcatgtctgctccgtcagccccgatgtttgaacaccaatgg
ggtcttcagaataatggtcaggaaacagaggcgcagctcggaagatcgggagtagatata
aatgcaataaatgcatggaatcttactcagggctcttcctctgttgtagtaggacttttg
gacacgggtgtggacatcagccacaatgacttaaaagacaacatatttgtaaatgcaaag
gaaattccgggcaatggcatagacgatgacaataacggatatatagatgatattaaagga
tgggacttcgtaaattcagataataccgtatttgatgatgcaacattagactttcacgga
acacatgttgcaggaataattgcagcagaagcaaacagtgagggaatatgcggtattgca
ccgaaagtaaaggtgctgccattaaaatttattaacggaaactggggctatacctgtgat
gcaatagatgcaattgaatatgcaatgaaaatgggtgttaaaataataaactgcagcttt
ggcggtaccgatgacaattttgcactgaaggatactatggcaaacagcggcatcctgttc
atatgtgctgcaggaaacagaggagcggatgttgcagtttccccggtatatcccgcatgt
tttgatattccgaatgtgttatcagtagcttccatagacagcaagggagtactttcaccc
tattccagctacggaaacaaaatacatgtagcggctcctggagtgaatattttaagtact
acacccggaaactcatatgattatttcaccggaacatcggcagccgttccttttgtaacg
ggtattgcagcgcttttgcaaagttatgtgccaaacctgacaataacacagatttcacag
cgtataaaagaaaacgtggtatcctgcacaaaccttagcggtaaggtttcctcaggagga
agggtagatgcgtatgcagccttgacaaacacaaaaccggaaccggatacatatgatggc
cccggaaatgacaacagtactgttccggcaggacaacagggcggtaatattgacacttgg
tacaccatggatcagcttgcaaaaataaaagagaagctccattacggggaatcaggagtg
aatcccgcatcaggaaacttctcggttacagtaaacgacatgagtgtccctgcacccggt
tttcaggtaaacatatcacgtacctacaactccagaagtgatgtcagcaaagaatttggc
agaggctggacctttggttttaccggaagagtcgaggggacggaggtagttgatgtttcg
cttccaaacggaagcattgagcgattcaggctaaatggcaatgtatatgagccggaggaa
tccagaagtaaatttgtaaaaaatgcagacggtacatatacattgactaccccggatcaa
tataagtatacctttaataccaaccgttatcttgtaaaaatggaggacagaaatggtaat
tccataaatataactgttgacggcagcgggaaaataaccaaaataaccgacaccgtgggc
agagcttttactgtcagctacggagcaaacggactggttcaaaaaattaccgacccggaa
aacaggacggtagcatacgagtatgacgctaataacagactgtcagtggttacagaccct
atgggcggtaaaatgaggtacttctatgatacatggggatatctgaatcagatacaggat
cataaccagaaaatagttgaaaaaataacatataatcatgcagaaggcgaaaaccagcac
aaggtatccgaggcaacagattctctgggagatacagtaaaatatgcctatgacatgaca
aataaaaaaactaccattaccgatataaatggaagggtatcctcctattggtttgactcc
tcattttttacaacacgtatacaggagcctgacggaaaatccagttatactgaatatttc
caaattggaggcaaaaacaaatatggtgatgtaaaatctcaaacggaccgtaatggaaat
aaaactcagtatgagattgatgatagaggtaatgtaactaaaattatcaatcctgacgga
agtacccaactaaaagaatatgatgaaaaaaacaatgtaacaaaagaagtagatgagtgc
gggaaaacaacctacaatttgtacgatgaaaacaagataaacctgataaagaaggtacaa
ccccttaacgggttagatgtatacgacggcacaagcaatacaggttttgcaataacctcc
taccaatattatacaggagaagaatcgggttcatctgcaaagggattattaaaaagtgaa
actgacccggaaggcaataccaccacatacacctacaacacttacggtgatgtaaaaacc
atatctgacccggagacaggaaaagttacgacttatgagtacaaccgcataggttggaaa
actgcacaaataaccccaaagggcaacaaaacagaatttgcttacgacaaaaacggccag
ctaatcaaaacaagaaccgtaagctcaaaaaatgaaacccaaagaactgtatatgatctg
ttgggaagaaaaatacaagaaattactccaaaccaatatgacagtactaaggacaatata
gaagccgatacatacactgacaatacggtgggaacaagatacgaatactttgacagtggt
aaaatcaaggaacaaaccaatgcaataggcgataaaacaagctacacttacgatgtatac
ggaaacactcttaccgaaacaaaacctaacggcgcaatttacaagtatgaatatgatgtt
ctggacagaccacttaaaatttacttcagagataattcatcagtagctgaagtactactt
acccaatatagttatacaactttggaggatggaaaaacacaaaaaacagaaacaaaatat
ctgaattccaaagacaaggctgttacggtttacacctatgactttgccgacagacttgta
gaacaacagaaccccgatggaaccaggctcagaacaatatacaacgcaaacggaacaatt
aacaggcagattgcagctaatggaagtagcacatacttcaaatatgacggccttaacagg
ttgacagaacagtggaccccctttgaagtatcaaacggaaacacactgtacacatacaac
aaaaccgaatatgacaaggctggaagaaaatctgcggtggaatcaggaaaagacaaggta
accctgtggtcaatacccgatagccttgcaataacaaactaccagtattacaaaaacggt
aacgtcagccagacaaacgattctgaaggaagaaagacagaatatctgtatgatgatgac
ggaaatgttgtaagagaaagtatatataccgatacaaccaataagcttgtaacagattat
gcatacaattatctcggaaatctggaaaaaaaggagcaacatgtaaaaacaggagacctt
tacggaaaagactttgacgacacaacggatactgtacttacaacctcctacacctatgac
aagaatggtaatacaaaaactgtgacagcccccaacaaagtaaccaccacctttgaatat
gatgtactggacagacagctgtcccaaagtgaacccggagtggacgaaaaaggtgaagcc
gttacaataaccaattccacaacctacgactgggccggaaacccgcttacaaaaacagat
gcaaagggcggtattacaaagtatgaatataatcagagaggattactgattaaagttaca
gatgcccaaaacggcgtaacagcgtacgactacgacctagctggaagaaagatagcggaa
gtaacaccaaaaaactatgacagcacaaaaagcatttatgacttgaacagggttgaatat
gtctatgatgaaatggacagagtactagtgaaaaaggacatatatatagaccctgttaca
aaccaatgggtaaccatatacacaaaaacctgtaaatatgataattctggtaatcttata
aaagaactcgatgcagcggggtatgactcaggagtaggaacaacaccgggagaaaaaata
aattcaggttatggtaccgagtatacatacaatttggcaaacctggtaataacgtcaaaa
gacccggttgcaaaggaacatgatcttgcatttacttccagatatgaatatgacggattg
gcaagaaagatatctgaaaccaatgcaaacaaagtggaaacccggtacacatacaatgat
gcaggagatatactgtcagtaagcttgaaaaagaatgcttcgtctacaccaaaggtagta
aagcattctacttatgaccttgcaggcagaatactggcgcagactgacggaaacggcaat
atcactacatttgaatataactctctggggaaagtcagaaagacagttgcaccgggagac
agcaccataccgtcaataatggtaacaagccagtacgacgaaatgggacaactaaagcaa
caactaaactcaatgggcaaggttgacctctatacctacgataatcaggggagacagctt
tcccatacagagaaaaagtccgataatacccaagccataactacgtattcaacctatgat
ataaatggaaacaaattctcggaaactgacggaaatggcaatgcaaagacatataagtat
gacagtttaaacagacttttagctgttgaaacaactgtaggtggcagggaaaaaacaact
acttgcacatacgatgctaacggaaacaaaacctctgaaactgactggcttggcaataca
agcactaatgtgtatgatcccttaaacaggctcgtagaaaaaagagatccctacaccaca
atacaaaagttagagtacaacaaaaacagcaaacagataaaatcaacagatgcattgggc
aacgaaacccgctacatatttgacaaaaacaacagactcattgcaaccatagaccctgag
ggccatacaacaagccagtcctatgatgatgtaggcaatatcatagccaaaacaagcggc
aggaacattaccacaacatatagattcgatgaattcaactggttggcagaggtaattaac
cccaagtcggagaaaacgacttatacctacgacttaaacggaaacaagttgactcagacc
gacggaaacggaaatacaacctcctatgaatacaacgctgcaaataaggttatcaggaaa
atagaccagggtggaagaataggtacaccggggaaatatacatatctggatgccaaaaca
gaaaagtacacctattttgcagacggcaacatggagacaaagaccgacagaaacggaaaa
cagaccgtatattcctacgatatacatggtagacttaccagaaaagcaataggagaagca
gcaatcggctatacctacgacaacaacgacaatcaactcaccataactgacaaaacgggg
actactgccagaacctatgacgaagaaaacagagtaataaccaaaaaagcaccgggcttc
ggtacaactacctatacctatgataatactgagggtggaggcttatactttgaaactgct
gaggatttcaagcacaacctaaccaaaaaggtatatgacaaagcaggcagactttacgag
gtgatatcagacggaaagactaccacatatgaatattacggtaacggcagtagaaaaacc
gtaacctacagtgacggagcaaaagaggaatatacctactacaaggacggactaaataaa
accctcacaaacaaaaaagcagatggaacagtaattgacacctacagttatacctatgac
gaagcccataaccagacttcaaagacagaccgaaaaggcactacaagctataactacgac
agtctcaacaggcttgaaaaggtaacggagccaaacggcaggacaaccaactacaccttt
gacaaggcaggaaacaggcttacagaaaccatacttgcaggtgcaacttctgtaaccacc
acatatacctataacgagcagaacagactggtatcaacagtaaagagaagcggcacggaa
acaataaccgacacatacaggtttgacaacaacggaaacacagtctcaaaaaccacagaa
acggtaaaaccggttgccacatctacatcaggtggcttcagtctggaaaagtcaggtaag
agtacggcaagcaatgtaacctactataagttcgatgtctggaaccaactgataaaaacc
actgcagggaagaaaacagcaacctattcctataacggggaaggctacagggtatccaag
accgaaaacgagcgtaccacaaactacctgtatgaagccgacaaggtagtactggaaaca
gacgtagaaggcaacgagacagccagaaacatatatggaacaaatctcctgacaagaact
gcacaaaatgatacaatgaactatatgtacaacggccacggagacgtaaccgcattagta
ggggaaaacggagcaatccaagcaacctactattacgatgccttcgggaacataacagag
cagacgggagatgttaacaacaacataacctacgcaggctaccagtacgataaggaaaca
gacctttactacctgaatgcccgctactatgacagtaaaacagccagattcctaagtgag
gatacctatacaggcgacccgaatgatccattaagtttgaatttgtatacgtattgtgtt
aataacccaattacatatagtgatccgacgggacattggcaggaaagtgataaaaatcta
attcaaagtgctagaattgcaatatctcagctgacagatatttatgtcacaacaagtgac
cctgaaataaagaaagcgtgtgcagcacaagcagcagctataagaggttgctctgacaat
attgcaacgacgcctcaatattctgaggttgggatgttatatgatcaacaattaaaaaaa
gacggttatgtttcagccagtgattggctaaaaattagtaacacgtataaaaaggagtca
acgcagagtgctataaatggattaaaaattactgaaagtccatatgtcccaagtacttat
aaaaatcaagctattaaagctacaatgaacactgttactgctggagttaaaaaatcaaca
acacagacaaaacctcaagtcagctccagtcctagtccgagaataacaaataatgggagt
actgttaatgggacgggcaatagtacaaaaagtctatttttaaactctgattttaattta
aatccagaaatacaacaaatgatatcatattatgatgatatgtatctatacgcaaaggtt
gcatatgacaataaaataataaaagactttgagtataatgcattaagtaaattatgtgaa
gagaaagctcagaatctaagagacgataataaaattaatacagacgatagttttgcatat
gaggtaatatgcggtttaggtggatttatcccgtatgctggtgttatattcgatgtattg
ggggatgcacaaccggtatatgctgctgatttatcaagtgttgccattgagaaaatctca
gatgcgaaaaacatggcggttataacatctgcgattagtagtaatgttaatattaaacat
acaatatacacattagttgacgaaacaactggagaggtgaaatatgttggtcgaacacga
aatccagctacaagaagaatagcacatagtttgagttctgataaggggaatttggtattt
aaagctgttgaaggctggacagatttgtcatacaatgaggctagagcagcagaacagata
ctttttgagcaatacggaggactagataaactaaaaaacaagataaacccaatgagcgca
aaaaagtttagtaaatatgtagattatgcttgggatgtattaaaaaaattaaaataa
DBGET
integrated database retrieval system
