Clostridium sp. BNL1100: Clo1100_3187
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Entry
Clo1100_3187 CDS
T01708
Name
(GenBank) spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
clb
Clostridium sp. BNL1100
Pathway
clb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clo1100_3187
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clb02000
]
Clo1100_3187
Transporters [BR:
clb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
Clo1100_3187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
AEY67334
UniProt:
H2JAA2
LinkDB
All DBs
Position
complement(3639012..3640061)
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AA seq
349 aa
AA seq
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MKRIISGILAAAVVAGSVALTGCGGASSDKTTLKVYNWGDYIGEDVIQKFEDKFNINVVY
DTFPTNEEMYVKLKAGGSDYDVAIPSDYMIKKMINEGMVKKINLNNIPNYKYIEEKFKNL
SFDPDNEYSVPYMWGTVGIIYNKTMVKEPVESWNILWDKKYDKQIFMLDSQRDSIGVTLK
KLGYSLNTKNKEELEKAKNELIKQKDIVQAYVGDEVKDKMIMGEGALAVVWSGDAVYMKS
QNKDLEYAIPKEGSNLWFDSMVIPSTAKHQKEAEEFINFMCDTEIALENTNYIGYSTPQT
EAKKKLDPVLLKDIAAYPTDEQMKDCEVFIDLDASIKDYDEIWTEITSR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaataatatcaggtattttagcagcagctgtggtagctggcagtgtagcttta
acaggctgcggaggagcttcaagcgataaaacaaccctaaaggtgtataactggggagat
tacatcggggaggatgtaattcagaaatttgaagataaattcaacattaatgttgtgtac
gatacatttcctacaaatgaagaaatgtatgtaaagcttaaagccggtggaagcgactat
gacgtggccattccatcagactatatgataaagaaaatgataaacgaaggtatggttaag
aaaataaatttaaataatatacctaactacaaatatattgaagaaaagttcaagaatctt
tcctttgaccctgataatgagtattctgttccttatatgtggggtactgtaggtattatt
tacaataaaacaatggttaaggaacctgtggaaagctggaatatactgtgggacaaaaaa
tatgacaaacagatattcatgctggacagccaaagggattctatcggagttaccttgaaa
aaactgggttattcccttaataccaaaaacaaggaagaactcgaaaaagccaagaacgaa
ttaataaaacagaaggatattgtacaagcctacgttggagacgaagtcaaggataagatg
ataatgggcgagggagccttggctgtagtttggtcaggggatgcagtatacatgaagagt
cagaacaaagaccttgaatacgcaataccaaaggaaggaagcaatttgtggtttgactct
atggttattccaagtactgcaaagcaccagaaggaagcagaggaatttataaactttatg
tgcgatactgagattgcacttgaaaataccaattatatcggatactcaactccgcagaca
gaagcaaagaaaaagcttgaccctgtgctattaaaggacattgcagcttatccaaccgat
gaacagatgaaagactgcgaggttttcattgatttggatgcttctatcaaggattatgat
gagatatggactgagattacttccagataa
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