Clostridium sp. BNL1100: Clo1100_3502
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Entry
Clo1100_3502 CDS
T01708
Name
(GenBank) type IV secretory pathway, VirD4 component
Organism
clb
Clostridium sp. BNL1100
Pathway
clb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Clo1100_3502
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AEY67628
UniProt:
H2J998
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Position
complement(3982848..3984668)
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AA seq
606 aa
AA seq
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MQTSQIITLIAVALTMFGVIGFLSLLAHYYTLNGIKSKTVGDGQHGTARWATKKEIQKTY
TEIRYEPEKWRKGENLPKAQGLIVGWRGASLFDKTAPHGYALIDDDDIHCLMIGAAGVGK
TANFLYPNLEYACACGMSFVTTDTKGDLYRNYAGIAKDHYGYDVAVIDLRNPTRSDGNNL
LHLVNRYMDLYLANPQNLSYKARAEKYAKITAKTIITSGGFDSAAAGQNAFFYDAAEGLL
TSVILLIAEYCEPQKRHIVSVFKLIQDLLAPSGVKGRTLFQLLLAHLPDDHKTKWFAGAA
LNSAEQAMQSVLSTALSRLNAFLDSELEQIMCFDTAIDAEKFCTKKSAIFLVMPEEDNTK
YFIISLIVQQLYREILSVADEHGGKLPNRVMMFLDEIGTIPKIESAEMMFSASRSRRVSI
VAIIQSFAQLEKNYGREGSAIIVDNCQDTVFGGFAPNSESAQILSKAMGNKTIMSGSVSR
GKNDPSQSLQMIERPLMTADELKSMPKGHFIVTKTGAYPMRTRLKLFLDWGITFGKPYEI
AEQSARQVQYADRRKVEEEIIRRNAACEDVPEEAVGEVAPSGGMLHTPAPAINLDPFEQK
QESIRR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaacatcccaaataatcacattgattgcggtggcgctgactatgttcggcgtcatc
ggctttttatcgcttctggcgcactactacacgctgaacggcataaagtccaaaaccgtg
ggcgacggtcaacatggtacggcgcgatgggcgacaaaaaaagaaatccaaaagacttat
accgaaatacgctatgagccggagaaatggcgcaagggagaaaaccttccaaaagcccag
ggactgatcgtcggctggcggggagcctcgctgtttgacaaaacagctccccacggctac
gcgctgatagacgatgatgatatccattgtctgatgattggcgccgcaggcgtcggcaag
accgccaactttctctatcccaatctggaatacgcctgcgcctgcggcatgagctttgtc
acgaccgacaccaagggggacctctaccgcaattacgccggcatcgcaaaagaccactac
ggctacgatgtggccgtcatcgacctgagaaaccccacccgctcggacggaaacaacctg
cttcatctcgtcaaccggtacatggacttatatcttgccaatccgcagaacctctcctac
aaggccagagcagagaaatatgccaagatcaccgcaaagaccatcatcacctccggcggc
tttgattccgcggctgcaggacagaatgctttcttctacgatgcagcagaaggtctcctg
acgtccgtcatcctgctcattgcggaatattgtgagccacagaagcgccatatcgtatcg
gtattcaagctcattcaggatctgctggcgcccagcggggtcaagggccggacgctgttc
caactgctcttggcgcacctgccggatgatcataaaaccaaatggttcgcaggagcggcc
ctcaattccgcagagcaggccatgcagagtgttctgtccacggcgctgtcccggctcaac
gcttttctggattccgaactggaacagatcatgtgttttgatacggccatcgacgcagag
aagttctgcacgaaaaaaagcgccatcttcctggtcatgccggaggaagataacacgaag
tatttcatcatatcgctgatcgtccagcagctctatagagagatcctgtcagtggcggac
gagcacggcgggaaactccccaaccgggtcatgatgtttttagatgagataggaaccata
ccaaaaattgagtctgcagagatgatgttcagcgcctctcgttcgcggcgggtgtccata
gtggcgattatacaatccttcgctcagttggaaaaaaactatggtcgggagggttccgcc
attatagtcgacaattgccaggacacggtgtttggcgggtttgcacctaacagtgagtcg
gcgcagattttgtcgaaagccatggggaataagactatcatgagcggctctgtcagccgg
ggaaaaaacgatcccagccagagtctgcagatgatcgagcgcccgctaatgacagcggat
gagctcaagtccatgcccaaaggccactttatcgtcaccaagaccggagcctatcccatg
cgtactcgtttaaagctgtttttggattggggcattaccttcggcaagccctatgagatt
gccgaacagtctgctcggcaggtacaatatgccgaccggcgcaaagtggaagaagaaata
attcgccgcaatgccgcctgtgaggatgttccggaggaagctgtgggggaggtggctcca
tcaggcgggatgcttcatacgcccgcgcctgcgatcaatctcgatccgtttgaacaaaag
caggagtctataaggaggtga
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