Clostridium sp. BNL1100: Clo1100_3542
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Entry
Clo1100_3542 CDS
T01708
Name
(GenBank) putative S-layer protein
KO
K20276
large repetitive protein
Organism
clb
Clostridium sp. BNL1100
Pathway
clb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Clo1100_3542
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
GspA_SrpA_N
PKD
PKD_4
Motif
Other DBs
NCBI-ProteinID:
AEY67667
UniProt:
H2J9T2
LinkDB
All DBs
Position
complement(4020350..4025002)
Genome browser
AA seq
1550 aa
AA seq
DB search
MKQKGKRIGILALVLLLLVCGGIYTAYRLHPENFIQKDEIITRGEFAAIMVRDIPLNTAN
AEKDPPSFPDINGHWSEASIEALIDAGIIDPLDYPDGFFPDDPITRAEIIKMLVRISGKD
EEAKNTQGHSGYEDQDAIKDGDKGYLIIGREDGIIGDTDDNKIHPNDPVTKGEADDLIDK
VKPQKSTPTQVSPSPAPGTSDQPTTTPVNPAQPTPTPVNPAQPTPAPTNPALHTPTPTPD
NPGNGSGGSSGGGSHYYPDAQVRFELPATAHTDTEIQVMPVWKYMSNFTWSLTKAAVDGS
QQPVALEDAISGTLGLEGGTIGFKEDGQYTLTATAKNSRGKETVLSKQITVYPIIDLSFD
LPETTHTDKSTILAFQLEKLYGHDIVWITEKDGEAVQPADILEGKLGNEGGTFVFRSKGE
YMLTASITDETGRVFTHTESTKVYPVAGIAFELPAASHTDTTLDVSTNLTEADGLTVDWS
LTKNGEAAKELADELEGALTNDGGKIRFRDKGVYMLTGTLTDETGRTFETSGTITVYLVG
SVGFYLPEITHTDTSVQVEASFQNLGTAEIQWSLTRNGESVPVADYMEGKLTDTDSTVRF
KEKGEYVLKAAFTDPAGRNYSYTTPIKVYPVPGITYKLPETAHTDTLVSVIPETLELDGL
KVEWLLENGFGFQDFATYVDGTLDNSGGSIRFKHAGAYELIARITDEIGRVFLFENGGKI
EVLPVLNISFELPESTHTDRTVDLRTRGKNNVLPVEWSLTKDGESVETSDALEGSLNAYG
GKIQFKDVGSYILTASMTDALGRVFSYSASTTVYPIPSISLSVQQTWHAGEAGTVSVSGT
DLENLTADWTIIQGDGGAQPYDIYTSGTLTKTGGSLTFPAKGQYELILTMTDPTGRTFIR
SRSITVYPIPSISLNVQQTWHAGEVGTVSVSGTDLENLTADWTVIQGSSSAKPYSAYASG
TLTKEGGSLTFPSKGQYELILTMTDPTGRTFTRSQSFMVYPIPSVSLSVQQTWYAGEAAT
VGVSGTDLESLTADWSVIQGNGSAKPYTAYASGTLTKAGGSLTFPSKGQYELILTLTDPT
GRTFARSQSFTVYPIPTMSIGVPSLTYSGESMAVTASGTELSGAAADWLLSVDGGEAKPY
TEYATGSLGISGGTLWFHTDKTVSVKLQAVVTDTNGRRFTFTSNAGLVKPIASFPFTVPS
SAHIGSGFYVSLPGTSGLEGRTLNWSLTKGGSAAGYTGSLTGSGGTIAIQSTGSYVLTAS
TTDSTGRTFTYSQNITITNNAPNKPTGSASVTRTAKAGKLLVNFSAYATDPDGDTVTLEY
SGNTSDSYYAVGAHTVKVRAKDAWGLYSDWTDITFTVSNSAPSTPVITRTPDGNSIAPGV
AITITAASTDPDGDAITYIWEGRPAQTSTAYPLGKNVVRVKAVDSTGAESPWTAIVFFVA
DPNRGGGMTLTGPESVILEQGIAGATITNYTFTVPPVSGHSGQDFGRVRGYNILTGQWDQ
LDYGTTTNGITFSRSLSPGLYSQLEFYYYTNHDCMYNKSNITYSVAFYFQ
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaaggaaaacgcattggcattctcgcccttgttctcctacttctggtctgc
ggcgggatctatacggcataccgcctgcatccggaaaatttcatccagaaggatgagatc
atcacccgcggcgagttcgccgccattatggtgcgggatatcccgctgaatactgcaaac
gcagagaaagacccgcccagctttcctgacattaacggtcactggtcggaggcaagcatt
gaagccctaatcgatgccggcattattgaccccctcgactatccggacggcttctttccg
gatgaccccatcacccgcgccgagatcatcaagatgctcgtgcggatcagcggaaaggat
gaggaagcgaaaaacacccagggacacagcggctatgaggatcaggacgcgatcaaagat
ggggacaaaggatatctcatcattggccgtgaggacggtatcatcggggacacagatgat
aataagatccatccgaatgatcctgtgacaaagggtgaagctgacgatctgatcgataag
gtcaagccgcaaaagtccacgccaactcaggtatctccttcaccagcccccggtacttcg
gaccagccgacgacaactcccgtaaatccggctcagccaacacccacgccggtaaatcca
gctcagccgacacctgctccgacaaatccggctctgcatactccgacacctacgccggat
aatccgggcaatggttccgggggtagttcgggaggaggctcacattattacccggacgca
caggtgcgatttgaacttcctgcgaccgcccataccgacacggaaattcaagtaatgcct
gtgtggaaatacatgagcaacttcacctggtcgttaaccaaagccgccgtggacggctcc
cagcagcctgtggcactggaagatgctatcagcggtaccctcggattggagggcggtacc
attgggttcaaggaggacggacagtataccctgaccgccacagcaaagaactccagagga
aaagaaaccgtactgtccaaacagatcacggtctatccgataattgatctgagctttgat
ctgccggaaacgacgcacacggacaaatcgaccatacttgcctttcagctggaaaagctc
tatgggcacgacatcgtgtggattactgagaaggatggagaagccgtgcagccagccgac
atcctggaaggtaaacttgggaatgaaggtggcacctttgtgttcaggagcaagggcgaa
tatatgctgacagcatctatcaccgacgaaaccggccgtgtctttactcatacggaaagc
accaaagtctatccggtagccggaattgcctttgaacttccagccgcttcccatacagat
acaacactggatgtttcaacaaatctgacggaagcagacggactgacggttgactggagc
ctgaccaaaaacggtgaagctgcaaaagaacttgccgatgagctggaaggtgctttgacc
aatgacggcggcaagatccgtttcagggataagggcgtgtatatgctcacgggaacgctc
accgatgaaaccggcagaacctttgaaacctccgggactatcaccgtctatctggtaggc
tccgttggattttatctgcctgagatcacccataccgatacgagtgttcaggtagaggca
tcattccagaatcttggaacagcggaaatccaatggtcgctgaccagaaatggagaatcc
gttcccgttgccgattacatggaggggaaactcaccgacacggacagcaccgtccgtttc
aaagaaaagggcgaatatgtgctgaaagccgcctttactgaccccgcgggaagaaactac
agctatactacgccgatcaaggtatatcccgttcccggcatcacctacaagctaccggaa
accgcccataccgacaccctcgtctccgtgattccagaaaccttggaattagacggttta
aaagtggaatggctgttagagaacggctttggattccaggattttgcgacttatgtcgat
ggaactctggataacagcggcggttctatccgattcaagcatgctggtgcctatgagttg
attgcgagaatcaccgatgaaatagggagagtattcctgttcgaaaacggcggcaagatc
gaagtcctgccggtgctgaacatttctttcgagcttcccgaatcgacccataccgaccgt
accgttgaccttcggacccgcggtaaaaacaacgtgctgccggtggaatggtcgcttacc
aaagacggagagtctgtggaaacttccgatgctttggaaggaagcctgaatgcctacggc
ggtaaaatacagtttaaagatgtcgggagctatatcctaacggcctccatgacggatgcg
ttgggcagagtgttctcctatagtgcatccactacggtctatccgatcccgtcaatttca
ctcagcgtccagcagacctggcatgccggagaagccggaaccgtcagtgtcagcggcacg
gacttggagaatctcaccgcggactggacaatcatccagggtgacggcggcgcacaaccg
tatgacatctacacttccggcactctgacgaaaacaggcggcagcctgactttcccagcg
aagggacaatacgagctaattctcaccatgacagaccccaccggccgaacctttatcagg
agccggagtattacggtctatcccattccttcaatttcactcaacgtccagcagacctgg
cacgccggagaagtcggaaccgttagtgtcagtggcacggatctggagaacctcactgcg
gactggacggtcattcagggaagcagtagcgcaaagccttattctgcctatgcctccggt
accctgaccaaagagggcggcagcctgaccttcccgtcgaagggacagtacgagcttatc
ctcactatgacggaccctacgggccgaacctttaccagaagccagagcttcatggtttat
cccatcccgtctgtttcactcagcgtccagcagacatggtatgccggagaagccgcaacg
gtcggtgtcagcggcacggacttggagagccttaccgcggactggtcggtcattcaggga
aacggtagcgcgaagccttatactgcttatgcctccgggaccctgaccaaagcagggggc
agtctgaccttcccctcgaaaggacagtatgaactgatcctcactctgacagacccgacc
ggccgaacctttgccagaagtcagagcttcacggtgtaccccattccaaccatgagcatt
ggcgtaccatcgctgacctacagcggtgagtccatggcggtcactgcctccggtactgag
ctgagcggagcagccgctgactggctcctttcagtggatggtggcgaggcaaagccctac
acggaatatgcaaccggctccctcggaatcagcggtggcactctgtggttccatacggat
aaaaccgtttccgtgaagctgcaggcagtggtcactgataccaatgggcgcagattcact
ttcacctctaatgcaggactggtcaagcccattgccagcttcccgtttaccgttccttcc
tccgcacatatcggctccggcttttacgtttctctgccgggaacctccggactggagggc
aggactcttaattggtcgctgaccaagggcggaagtgcggctggctacactggaagcctc
acgggcagcggtgggaccattgctatccaaagtaccggaagctatgtcctaactgccagc
actaccgacagcaccggaagaactttcacctattcgcagaacatcaccatcaccaacaac
gcaccgaataaaccaaccggaagcgcatcggtaacccgaaccgcgaaggctggcaaactg
ttggtgaacttctcagcctatgccaccgatccggacggtgacactgtgaccttggaatac
tccggcaacacctccgacagctactatgctgtgggtgcccatacagtgaaggtcagggca
aaagacgcctgggggctgtactccgactggacggatatcacctttaccgtttccaattcc
gctccatcgacccctgtcatcacccgtactcctgacggcaacagcattgcaccaggcgta
gctattaccatcacagccgcaagcaccgaccccgatggagatgccatcacttatatttgg
gaaggccgtccggcacaaaccagcactgcctatccattgggcaaaaatgtggttcgcgtg
aaggcagtggactctaccggcgctgaatctccatggacagctattgtgttcttcgttgcc
gaccccaatcgaggcggcggcatgacgctcaccgggccagagtcagtaatcctggaacag
ggcattgcgggtgcgaccataaccaattacacctttacggttccgcctgtttccgggcac
tcaggacaggactttggtcgtgtccgcggctataacatattgacgggccaatgggatcag
ctggattacggcacaacgaccaacggcatcaccttcagccgcagcctgtcgcccggactc
tacagccaattggagttttattactacacaaaccatgattgcatgtacaacaaaagcaac
atcacgtactccgtcgcattctattttcagtaa
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