Clostridium sp. BNL1100: Clo1100_3806
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Entry
Clo1100_3806 CDS
T01708
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clb03032
]
Clo1100_3806
03036 Chromosome and associated proteins [BR:
clb03036
]
Clo1100_3806
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_3806
DNA replication proteins [BR:
clb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Clo1100_3806
Chromosome and associated proteins [BR:
clb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Clo1100_3806
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Clo1100_3806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
Peptidase_C80
VWA_3
Motif
Other DBs
NCBI-ProteinID:
AEY67919
UniProt:
H2J913
LinkDB
All DBs
Position
complement(4269777..4270052)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELVDKMAEKSGLSKKDSDKALNAMLESVEEALTSGDKVQLIGFGSFEVKQRAARKG
RNPQTMEEINIPESKAPVFKAGKDLKEMINK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcggaattggtagacaaaatggcagagaagtcaggcctttcaaaaaaagac
tcagataaagctttaaatgcaatgctggaaagcgtagaagaagcgttaaccagtggagac
aaggttcagcttattggctttggatcattcgaagtaaaacagagagcagccagaaaaggc
agaaacccacaaacaatggaagaaataaatattccggagagtaaagctcctgtatttaag
gctggcaaggacttaaaggaaatgattaacaaatag
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