Clostridium sp. BNL1100: Clo1100_3889
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Entry
Clo1100_3889 CDS
T01708
Name
(GenBank) ATPase component of ABC transporters with duplicated ATPase domain
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
clb
Clostridium sp. BNL1100
Pathway
clb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Clo1100_3889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clb02000
]
Clo1100_3889
01504 Antimicrobial resistance genes [BR:
clb01504
]
Clo1100_3889
Transporters [BR:
clb02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
Clo1100_3889
Antimicrobial resistance genes [BR:
clb01504
]
Gene variants
Macrolide resistance genes
Transporters
Clo1100_3889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
RsgA_GTPase
MMR_HSR1
Dynamin_N
AAA_15
YobI-ATPase
AAA_23
nSTAND1
ABC_tran_Xtn
DUF4024
PduV-EutP
DUF2672
nSTAND6
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AEY68002
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All DBs
Position
4362788..4364254
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AA seq
488 aa
AA seq
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MSLINVTNLTFAYDGSYDNIFENVSFQIDTDWKLGFTGRNGRGKTTFLNLLLGKYEYSGS
ISSKVPFEYFPYEVKNKENNTIDIIEEVFPNYVLWEVMRELSLLEVDDDVLYRPFDTLSN
GEQTKVLLAALFLKENSFLLIDEPTNHLDINARKVVSDYISTKHGFILVSHDRAFLDNCV
DHILSINKTNIEIQKGNFSSWWENKEMQDSYERAENDKLKKDIKRLSEAAKRTSDWSDKT
EKSKIGNHAPDRGFIGHKAAKMMSRSKAIQARQQSAIEDKSNLLKNIESSEKLKIAQLNF
HTDRLVELENVSIFYGDKTACDNVTFTIEQGDRIALMGKNGSGKSSIIKLICGEDINYSG
TIRKSNQLKISYVSQNTTQLCGNLSDYARANEIDESLFKAILRKLDFSRVQFEKDISDFS
GGQKKKVLIAKSLCDKAHLHIWDEPLNFIDVISRMQIEELLLEHQPTILFVEHDIEFCNN
IATKIVQL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaattaacgttacaaatctgacttttgcctatgacggcagttatgataatata
tttgaaaatgtaagcttccagatagatactgattggaagctgggctttacagggaggaat
ggcaggggaaaaactacattcctcaatctcctgctgggcaagtatgaatacagcggtagt
atttcgtcaaaagttccctttgaatatttcccttatgaggtaaaaaataaagaaaacaat
accatagatattattgaagaagtttttcccaattatgttctgtgggaggttatgcgtgag
ctgtccttattggaggttgacgacgatgttttatacaggccttttgatactttgtccaac
ggagagcagacaaaggttttgcttgcagcactttttctgaaagagaacagttttttgctt
attgatgaacctacaaatcatttggatataaatgcaagaaaagttgtcagcgattatatc
agtacaaagcatggatttatcttggtttcccatgacagggcttttttagataattgtgtt
gatcatattctttctattaataaaactaatattgaaatacagaaaggaaatttttcttcc
tggtgggaaaataaagagatgcaggatagctatgaacgtgcggaaaacgacaagctcaaa
aaggatatcaaaagactttccgaagcggcaaaacggacatctgactggtcagataaaact
gagaaatccaagattggcaatcacgcacctgacagaggtttcataggtcataaggctgca
aaaatgatgagccgttcaaaagctatacaagcaagacagcagtcggcaattgaggataaa
tccaatcttctcaagaacatagaaagctctgaaaagcttaaaattgcacaactgaatttt
catacagacagacttgttgagttggaaaatgtctctatcttctatggtgataaaacagct
tgtgataacgtgaccttcaccatagaacaaggggacaggatagccctgatgggtaaaaac
ggttcgggcaagtcaagtataataaagcttatttgcggtgaggatattaattattccggg
actatcaggaagtcaaaccagttgaagatttcctatgtatcccagaataccacccaactt
tgcggaaatctaagtgactatgccagggctaacgaaattgacgagagccttttcaaggct
attttaaggaagcttgatttttccagagtacagtttgagaaagatatttctgatttcagc
ggaggacaaaagaaaaaggtattgattgctaaaagcctttgtgataaagcccacctgcat
atatgggacgaaccgctgaattttattgacgtaatttcacgtatgcagattgaagaactg
ctattggaacatcagccgactattctctttgtagaacatgatattgagttttgtaataac
attgccactaagattgtccagctgtaa
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