Clostridium sp. BNL1100: Clo1100_3989
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Entry
Clo1100_3989 CDS
T01708
Name
(GenBank) signal transduction histidine kinase
KO
K07652
two-component system, OmpR family, sensor histidine kinase VicK [EC:
2.7.13.3
]
Organism
clb
Clostridium sp. BNL1100
Pathway
clb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Clo1100_3989
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clb01001
]
Clo1100_3989
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
clb02022
]
Clo1100_3989
Enzymes [BR:
clb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Clo1100_3989
Protein kinases [BR:
clb01001
]
Histidine kinases
OmpR family
Clo1100_3989
Two-component system [BR:
clb02022
]
OmpR family
VicK-VicR (cell wall metabolism)
Clo1100_3989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
PAS_8
PAS
PAS_9
DUF7260
DUF2336
Motif
Other DBs
NCBI-ProteinID:
AEY68097
UniProt:
H2JAL8
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All DBs
Position
complement(4460364..4462187)
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AA seq
607 aa
AA seq
DB search
MKFWKGFFRLLSSLQWKLVYIFISMCIILVSVVYVVINTGLQNIYYDSFANSIETGYKNW
IDVRGGVPESNQKLSDYFTEGGDALFFGANSSYLGMTIIDLTKIQTSTGGILYSSEKGYT
DDSEEFANNIKTSESLMSIWAGNQPQKNERLIKGANGKYFEYIKQPQDNLIFYFTYQEEA
WLPILEKFNYLILTSALIAVFLSLFLGYMLSKTITSPIISVMHKAEKVAEGDFGEQLAVK
SEDEIGNLTRTFNYMASELKKTLSEISSEKNKVETILNYMADGVIAFDLKGMAIHANPAA
RKLLGNDVVNNPFKEFAVKVGLDVRIEDIVYFEESPVRESDTILNDMYVKVYFAVFTDTH
KKPEGIIVVLHDDTEHQKLDSMRREFVANVSHELRTPITSIKSYTETLLEGAMEDQETSK
RFLSVIDSEADRMTRLVKDLLQLSRLDNQQMNWKMESVSLDAIVKAIVERLQIEAQRKHQ
KLESYVIGDIPAISADKDRLEQVIVNLISNSIKYTSEHGEITVYVGIIYNDIYVKVTDTG
IGIPSESLPRVFERFYRVDKARSRDMGGTGLGLSIAKEIVQAHGGTINISSEIGKGTEVT
VKLPCAV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttggaaagggttttttaggcttctcagcagtctgcagtggaagcttgtttac
attttcatttcaatgtgtattattctggtttccgtagtatatgtggttattaataccggg
cttcagaatatatattatgacagctttgcaaacagtatagagacagggtataaaaactgg
atagatgtaagaggcggagttccggaatccaatcaaaaactttcggattattttactgaa
ggtggggatgccctgttcttcggggcaaattcctcatacctcggaatgacaataattgac
ttaacaaagatacagacttctacaggcggaatcctttattcgtctgaaaagggttatacg
gatgattctgaggagtttgcaaataatattaaaaccagtgaaagtctcatgtctatctgg
gcaggtaaccaaccccagaaaaacgagcgtttaattaaaggtgctaacggtaagtatttt
gaatatattaaacagcctcaagataatttgattttttactttacgtatcaggaagaagca
tggctgccaatattggagaaatttaactacctgatacttaccagtgctcttatagcagtt
tttttgtcattgtttctgggatacatgctttcaaagactattacatctccgataataagt
gttatgcataaggctgaaaaagttgctgaaggcgattttggcgaacagctggcagttaaa
tcggaagacgaaataggaaacctgacaagaaccttcaactatatggcatctgagcttaag
aagacattgtccgagatttcaagtgagaagaacaaggttgagacgatactcaactacatg
gctgacggtgtaatagcctttgacttaaaggggatggctattcacgctaacccggcagca
agaaagctccttggcaatgacgtggtaaacaatcctttcaaagaatttgccgttaaggta
ggtctggatgtcagaattgaagatatagtttattttgaagaatcacctgtgagggaatca
gatactattttaaatgatatgtatgtaaaggtgtattttgctgtatttacagatacccat
aaaaaaccggaaggtattatagtagtacttcacgatgatactgaacaccaaaagcttgat
agtatgagacgagaatttgtagcaaatgtttcacatgaacttcgtactcctattacttca
ataaaaagctataccgaaacactcttggaaggtgctatggaggatcaggaaacatcaaaa
cgttttctaagtgtaattgattccgaggctgatagaatgaccagattggtaaaggatttg
cttcagttatccagacttgataatcagcagatgaattggaaaatggaaagtgtgtctctg
gacgcaattgtaaaagctattgtagaaagactgcaaattgaagcacaaagaaagcatcaa
aagcttgaaagctacgtaataggagatattcctgcaataagtgctgataaggacagattg
gaacaagttatagtaaaccttattagcaactcaatcaagtatacctctgagcatggtgaa
ataacagtttatgtaggtattatctataacgatatatatgtaaaagttacggatacaggg
ataggaattccaagtgagtccttacccagagtgttcgagaggttctacagggtagacaag
gcaaggtcaagagatatgggaggcacagggttaggcctttctattgccaaggaaattgtt
caggcacacggcggtactataaatatttccagtgaaatagggaaaggtaccgaggtaaca
gttaaattaccatgtgcagtgtaa
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