Clostridium sp. BNL1100: Clo1100_4113
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Entry
Clo1100_4113 CDS
T01708
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clb03016
]
Clo1100_4113
Transfer RNA biogenesis [BR:
clb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Clo1100_4113
Prokaryotic type
Methyltransferases
Clo1100_4113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
RsgA_GTPase
MMR_HSR1_Xtn
Arf
Ras
AAA_18
Dynamin_N
AAA_16
AAA_24
AIG1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEY68210
UniProt:
H2JBC3
LinkDB
All DBs
Position
complement(4609742..4611124)
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AA seq
460 aa
AA seq
DB search
MYNEDTIAALSTPYGTGGIGVIRISGKKAFDVASKIFQSSKAMEEIQSHTVTYGKIVDEE
SKDVIDEVLLLKMCKPNTFTRENVIEIHCHGGIVVINRVLELIFKNGVRPAEPGEFTKRA
FLNGRIDLSQAEAIIDLINSKTVESSKAAVSHLEGRLSSRLKSIREILVGLLAHIEVTVD
YPEHDIEEITGEKVLENLINIKDELHTLAGTFERGKILREGLNIVIAGKPNVGKSSLLNQ
LSGSLKAIVTDIPGTTRDIIEEYVNIKGIPAKITDTAGIRSTQDVVEKIGVNKAYEAVEH
ADLTIAVLSAATGIQEEDIKILDLIKNKKALILINKIDLVDNDQVIEIKSQLEEYDIVLN
ASVINARGIEELETTISELFIKGRISGNDEVLLTNSRHKYLVDRAIEDIQQALNSFNTGM
PLDMVTIDIKSCADNIGQITGESIDEAVMHDIFSRFCIGK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatgaagatacgatagcagcactgtctactccgtatggaacaggtggaatcggt
gttattcgaataagcggaaaaaaggcatttgatgtagcaagtaagatatttcaaagttca
aaagcaatggaggaaattcagtcacatacggtaacatacggaaaaattgttgatgaggaa
tcaaaagacgttatagatgaggtattactactgaaaatgtgtaagcccaatacctttaca
agggaaaatgttatagaaatacattgccatggtgggattgtcgtaataaaccgtgtattg
gagcttattttcaaaaatggagtaaggcctgctgaaccaggagaattcactaaacgtgct
tttttgaatggtagaatagatttatcacaggcagaggctataatagatcttattaactct
aagaccgttgaaagttcaaaggctgcagtaagccatctggaaggaagattgtcctctcga
ttaaaaagtataagagaaattttagtaggattgcttgctcatattgaggtaactgttgat
tatccagagcacgatatagaagaaataacgggagaaaaagtattagagaatcttataaat
ataaaagatgagcttcatactctggcaggaacttttgagagaggcaagatattgagagaa
ggattaaatatagtaattgcaggaaagccaaatgtaggtaagtcctctttgttaaaccaa
ctgtcaggaagtttaaaggcaattgtaactgatattccgggaacaacaagagatattata
gaggagtacgtaaatattaagggaattccggcaaaaattactgatacagccggtattagg
agtactcaggacgtagttgaaaaaataggagtaaacaaggcttatgaggctgttgaacac
gccgatcttacaatagcagtactttctgcggcaacagggatacaagaagaagatattaaa
attttagatttaataaaaaataaaaaagctttaattttaataaacaagatagatttggta
gataacgatcaagttattgaaataaaaagtcagttggaagaatatgatattgttttaaat
gcatcagttataaatgctcgaggaatagaggaattggaaacaacgatttcggaattattt
atcaaaggaagaatatctggtaatgatgaagttctgttaacaaattccagacacaagtac
cttgtggacagagctattgaggatattcaacaggcattaaattcttttaatacaggaatg
cctctggatatggtaactattgatataaaaagctgtgccgacaacataggacagattaca
ggggagtcaattgacgaagctgtaatgcatgatatattcagtcgtttttgtattggaaaa
taa
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