Caldicellulosiruptor acetigenus 6A: Calla_0044
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Entry
Calla_0044 CDS
T01600
Name
(GenBank) transcriptional regulator, IclR family
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
clc
Caldicellulosiruptor acetigenus 6A
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clc03000
]
Calla_0044
Transcription factors [BR:
clc03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Calla_0044
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_11
HTH_24
MarR
TrmB
RPA_C
Dimerisation
Penicillinase_R
HTH_23
HTH_5
HTH_3
Fe_dep_repress
HTH_20
RNA_pol_Rpc34
Topoisom_bac
Dimerisation2-like_dom
DnaD_N
FeoC
HTH_69
Rrf2
LexA_DNA_bind
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AEM72739
UniProt:
G2PV48
LinkDB
All DBs
Position
55719..56513
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AA seq
264 aa
AA seq
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MAQNSVQSIERAFEIIEALAVEPKGLSISELSQKLSLHKATIHRILQTLLSRGYVQKDPQ
TLRYKLGVKFVEISSLYLNNIELKTEAHPFLRELVAMLNATVHLAILDGSDVVYIDKIEQ
VNSIRLYSSIGKRVPAYCTALGKVMLSKFSDEEVEKMLSKISLQPYTQNTITNVEKLLDE
IRTVRNRGFAVDNEELQEGVRCIAAPIYDYRGQMIAAISISAPVSVLPPHKDEENAQKVL
ETAKKISHRLGYVEGKKDYQGKEM
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaattctgttcagtcaattgaaagggcgtttgagataattgaggctttggct
gttgagccaaaagggctttcaatcagtgaactttcccaaaaactttctcttcacaaggct
accatccacaggattttgcagacattacttagcagagggtatgttcaaaaagatcctcag
acattgcgctacaagcttggtgtaaaatttgttgagatttcgagtctttatcttaacaac
attgagctcaaaaccgaagcacatccgtttttgcgtgagcttgtagctatgctaaatgcc
actgtgcacttggcaattcttgacggtagcgatgttgtgtacattgacaagattgaacag
gtaaactcaataaggctttactcctcaattgggaaaagagtccctgcatactgcacagcg
cttgggaaagtaatgctcagtaagttttcagacgaagaggttgaaaagatgttgtctaaa
atttccctgcaaccatatacacaaaacaccatcacaaatgtagaaaagcttcttgatgag
ataaggactgttcgaaatagaggctttgcagttgacaatgaagaattgcaagaaggtgtc
aggtgtattgccgcacccatatatgattacagaggtcagatgattgctgccattagcatt
tcagcacctgtgagcgtgctgccacctcacaaagatgaagagaatgcgcaaaaggtatta
gagactgcaaagaagatttctcacaggcttgggtatgtcgaggggaaaaaagattatcaa
ggaaaggagatgtaa
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