Caldicellulosiruptor acetigenus 6A: Calla_0206
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Entry
Calla_0206 CDS
T01600
Name
(GenBank) glycoside hydrolase family 10
KO
K01181
endo-1,4-beta-xylanase [EC:
3.2.1.8
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Brite
Enzymes [BR:
clc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.8 endo-1,4-beta-xylanase
Calla_0206
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_4_9
Glyco_hydro_10
CBM9_1
SLH
GH101_dom-5
Mann_GBD_bact
TFIIA
Motif
Other DBs
NCBI-ProteinID:
AEM72886
UniProt:
G2PWE2
LinkDB
All DBs
Position
236787..241568
Genome browser
AA seq
1593 aa
AA seq
DB search
MRKRAIALFVTLIFVMSILSPGYLPFLSTKANAQTQNTPTILRFDFESGNQGWTGRGLST
TVATVYNVAYEGDYSLKVSGKNASWDGAVIDLTDKLSANVSYTVSLFVHHSDPKPQRFSI
YAYVKDSASEKYIPVVDKVAVPNYWKQLVGKFTINTSNPVEKLQLLVCVPTSRSLEFFID
SVVIASTASVPSGVVKSTNFESGTTEGWQARGTGSDAQISVVSTIAHTGSKSLYVTGRVQ
TWQGAQIDLTSLLEKGKEYQFSVWVYQDSGSDQKLTLTMQRKNADGSTNYDTIKWQQTVS
SNTWVELTGSYTVPTTATQLIFYIESPNATLSFYIDDFTAVDKNAPVVAPGVVKSATFEG
GTTEDWQARGNGVTISVVNTVAHNGSKSLYVTGRSSTWHGAQIDLTSVLEKGKDYQFSVW
VYQDSGSDQKLTLTMQRQNADGTTNYDSIKYQQTVATNTWVELTGSYTVPTTATQLILYV
EAADTTLSFYIDDFTAVDKNPEVIPTVSRVPEWEIPSLFEQYTNYFSIGVAIPYKVLTNP
TEKAMVLKHFNSITAENEMKPDAIQKTEGNFTFNVADQYVDFAQQNRIGIRGHTLVWHQQ
TPNCFFQHSDGTPLDPSNPADKQLLRDRLRTHIQTLVGRYAGKIYAWDVVNEAIDENQPD
GYRRSEWYRILGPTDTTDGIPEYILLAFQYAREADPNTKLFYNDYNTENPKKRQFIYNLV
KKLKERGLIDGVGLQCHINVDSPTVKEIEDTIKLFSTIPGLDIHITELDISVYTSSSQRY
DTLPQDIMIKQALKFKELFEMLKRYSYVVTNVTFWGLKDDYSWLSTSRPDWPLLFDNNYQ
AKYNYWAIVEPSVLPLAINKGYANNASARIDGVLDREYKGAIPIKITNESGQEVASVQAL
WNPNELSLYISVNDTTIDAANDKVVVFVDQDNGKMPEIRPDDYWVSVTRTGAKAQSAQGY
VKDYAVVQQANGYVVELKLLINNTLTVNSSIGFDVAIFDNEVQYSWNDKTNSQFIETDNY
GILTMADSVKFASAPKGKAIIDAELDDTWKNAQEITTDTKVTVTGTVYDSAYAKAKMMWD
ENSIYVYAIVYDPLLNKANTNPWEQDSIEIFVDENNHKTPYYENDDVQYRVNYENTQTFG
TNGAPQNFITATKIIPNGYIVEAKVYMRTTKLSEGMVIGFDIQVNDADHTGKRVGVLTWN
DKVGNNYRDTTKFGCLELVAAPVSQPPIQAPSPSQPTTITYILTPTPTQPSTQTQQQPAQ
QPSQQQQQPQQQQPAQTQQPQTQPAQKPQNVVSVKIDQTKTETFTVGADTKVVVPQGSVT
GANAIVTVEKVAKLENNVGIGAVIATPVKVSIESGNIAKPIQIELKVDPAAFKDDRIPIA
FVYDDSKGKWTPVATKKAINTVTVATTKAGTVAVVAVKLEDVYKDISKEHWAYNTFKQAI
TSGLIVGYEDMTLKPAKNVTFAEAAVVAQRAFEITPKDYNKLANVPDWASLAVKSLIDNE
IVTEIDNVNKPLTRIEAVSIIMKLLEKAGVTAEPAELEFSDLFEQSSIDVEYLSKAYKLG
IVKGYTDGTFRPQNTITRAELLTLLIRALNYVK
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaagagcaatagctttatttgtaactctcatctttgtcatgtctattttaagt
ccaggatatcttccatttctgagtactaaagcaaatgctcaaacacaaaatacaccaaca
attttaagatttgattttgaaagcggtaatcaaggctggacggggagaggtctttcaaca
actgttgcaaccgtttacaatgttgcttatgaaggtgattattcattaaaagtttctggc
aaaaatgcttcatgggatggagctgttattgatttaacagacaagctttcggcaaatgtg
agttatacagtttctttgtttgttcatcacagtgatccaaaacctcaaagattttcaata
tatgcatatgtaaaagattcagcaagtgagaagtatattcctgttgtagataaagttgca
gttcctaattattggaagcaactggttggtaaattcacaattaacacttcaaatccagtc
gaaaagctccagcttcttgtctgtgttcctacaagtagatcattggagttttttattgat
agtgtagtaattgcaagtactgcatcagtgccatctggagttgtaaaatctacaaatttt
gaaagtggtacaacagaaggttggcaagcaaggggaacaggttctgatgctcagattagt
gttgtttcgacaatagcacatacggggagtaaaagcttgtatgtgacagggagagttcaa
acgtggcaaggtgcgcaaatagatttgacaagtttgttagagaagggtaaagaatatcag
ttttctgtgtgggtatatcaggatagcggaagcgaccaaaagctgacactaaccatgcaa
aggaaaaatgcagatggaagtacaaattatgatacaataaaatggcagcaaacagtttca
agcaatacatgggtagagctgacaggttcatatacagtgccaactacggcaactcagctg
atattctacattgaatcacccaatgctaccctgagcttttatattgatgattttacagct
gttgataaaaatgccccagttgtagcgccaggagttgtaaaatcagcgacatttgagggc
ggtacaacagaagactggcaagcaagaggaaatggagtaactatttctgttgttaacaca
gtggcacataatgggagcaagagtttgtatgtgacagggagaagttcaacttggcatggt
gcacagatagatttaacaagtgtattggagaaaggcaaggattatcaattttctgtgtgg
gtatatcaggatagtggaagcgatcagaagctgacattgaccatgcagaggcaaaacgca
gatggcacaacaaattatgattctataaaatatcagcagacagtagcaacaaatacatgg
gtagagctaacaggttcatatacagtgccgacaacagccacccagttaattttatatgtt
gaagctgcagatactaccctaagcttttatattgatgattttactgctgttgataaaaac
ccagaggtaataccaacagtatcgagagtaccagaatgggaaattccttcactctttgag
cagtatacgaattatttcagcattggtgtggcaataccatataaagtacttacaaatcca
accgaaaaggcaatggtactcaaacatttcaacagtataacagctgagaatgaaatgaaa
cctgatgctattcaaaagacagaagggaattttacatttaatgttgcagaccaatacgta
gattttgcacagcaaaatagaattggaatcagaggtcacactcttgtttggcatcagcaa
acaccaaattgtttcttccagcatagtgatggtactccgcttgatccaagcaatcctgct
gacaaacaacttctacgcgatagattaagaacgcatatccaaacacttgttggaagatac
gcagggaaaatttatgcatgggatgttgtaaacgaggcaattgacgagaaccagccagat
ggatacagaagaagtgaatggtacagaatattggggccaactgatacaacagatggcatt
ccagaatatattctgcttgcattccagtatgcaagagaggcagacccaaatactaagctc
ttttataacgactataatacagaaaatccaaagaaaagacagtttatatacaatcttgtt
aagaagctcaaagaaagaggcttgattgatggtgtaggtctgcagtgccatattaatgtc
gattcacctacagttaaagagatagaggatacaattaaactgtttagtacaatccctggc
ttagacattcacattacagagcttgacattagcgtttatacaagcagcagccagagatat
gatactcttccacaggacataatgataaaacaggctttgaagttcaaagagctttttgag
atgctaaaaagatatagctatgttgtcacaaacgttactttctggggactcaaagatgac
tattcatggctttcaacaagcagacctgactggccactgctgtttgacaacaactaccag
gcaaaatataattattgggcaattgttgaaccgtcagtattgccacttgctataaacaaa
ggatatgcaaacaatgcatcagcaaggatagatggagttttagacagagaatacaaaggt
gcgattccaattaagattacaaatgaaagtggtcaagaagttgcaagtgtccaagcgctt
tggaatccaaatgaactcagcctctatatatcggtcaatgacacaacaatagatgctgct
aatgataaagtagttgtatttgtagaccaggataatggaaaaatgccagaaattaggcct
gatgattattgggtttcagttacaagaactggtgcaaaagcacaatcagctcaaggttat
gtaaaagattatgctgtcgtgcagcaagcaaatggatatgtggttgagttgaagctttta
attaataacacgttaactgttaactcttctataggctttgatgtagcaatctttgacaat
gaagttcaatatagctggaatgacaagacaaactcacagtttatagaaactgataactat
ggtattttaacaatggcagatagcgtcaagtttgcttctgctccaaaaggtaaagcaata
attgatgcagaattagatgatacatggaaaaacgctcaggaaataacaactgacacaaag
gtcacggttacaggcacagtatacgactcagcttatgcaaaggctaagatgatgtgggat
gaaaatagtatctatgtctatgcaattgtttatgacccgcttttgaacaaggctaataca
aatccatgggagcaggattcaattgagatatttgtggatgaaaataatcacaaaacgcct
tactatgaaaatgatgatgttcagtacagagtgaactatgagaatactcaaacatttggc
acgaacggtgctcctcagaacttcattacagcaacaaagataattccaaacggatatata
gtggaagctaaagtttacatgaggacgacaaagctttctgaaggaatggttataggcttt
gacattcaagtgaatgatgcagaccatacaggtaaaagagtcggtgttctaacctggaat
gataaggttgggaacaattatagagacacaacaaagtttggatgcttagagcttgtagca
gcacctgtaagccagccaccaatacaagctccatcaccatcacaaccaacaacaataacg
tatatactaacaccgacaccaacacagccatcaacccaaacacagcagcaacctgctcag
caaccatcacagcagcaacagcagccgcaacaacaacagcccgcacagacacaacaacct
cagacacagcctgcacaaaagcctcagaatgttgtttcagtaaagatagaccagacaaaa
actgagacatttactgttggcgctgataccaaggttgttgtacctcaaggttctgtaact
ggtgcaaatgcaattgttacagttgaaaaagtagctaagcttgaaaacaatgttggaata
ggtgcagttattgcaacacctgtgaaagtttcaattgaaagcggtaatattgcaaaacca
atacaaattgagttgaaagtagacccggcagcattcaaagatgatagaataccgatagca
tttgtatatgatgatagcaaaggaaagtggacacctgttgcaaccaagaaagctataaac
acagtaacagttgctactacaaaagctggaactgtggctgtagttgctgtcaaacttgag
gatgtatataaagatatttcaaaagaacattgggcatacaatacatttaaacaggctatt
acgtcaggattgattgtaggttatgaagatatgacattgaaacctgctaagaacgtgact
tttgcagaggctgcagttgttgctcaaagggcatttgaaataacacctaaggattacaat
aagcttgcaaatgtacctgactgggcatctttagcggtaaaatcgttgattgataatgaa
attgtcactgaaatagataatgttaataaaccacttaccagaatagaagcagtctcaatt
attatgaagcttttagaaaaagcaggtgttacagctgaaccagcagagcttgaatttagt
gatttgtttgagcagtcatctattgatgttgagtatttatccaaagcatacaaacttgga
attgtgaaaggatatactgatggtactttcagaccacaaaatacaataacaagagcagaa
ctgttgacgctgcttataagggctctgaattatgtaaaataa
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