Caldicellulosiruptor acetigenus 6A: Calla_0306
Help
Entry
Calla_0306 CDS
T01600
Name
(GenBank) Peptidoglycan-binding lysin domain-containing protein
Organism
clc
Caldicellulosiruptor acetigenus 6A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SipL
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AEM72975
UniProt:
G2PX20
LinkDB
All DBs
Position
357768..359303
Genome browser
AA seq
511 aa
AA seq
DB search
MEKRFEKVEYMNVYGTDSQKVIVEGEILLPEIKPDAVKVLQTDSEILITNVEVLNDKVIV
QGEIEFRVIYLSSDPQRKVASVSSSAEFSKTFDMLGVRPTMAYEVKDDLIYTFCSLLSPR
KLSAKAIAEITVLVKAPATVEYLADIEEDSIKYLKEKISISNPRSMTEEISKREILEIPQ
GKPSIREILRCFARLSDRNIKFDRKKMTFDLKVDLKTLYSPDVGQNPIEMVEHEVLIQHT
AEVPDSPDDVEPVIKFYIKSFKVLPKTDEIGELRRIEYDITIEAEITFHDVKTIEPIVDA
YSTAYEIKDSKKLLNIEQFVGKVRHMHLLKDTITLPIEPEQIFSVSGRIEVDVIKPEKNK
INIKGVTVVFLIYLSKDQQDIIKNTASQIPFDVKLDIEGVEETDRAFANIEIENISFSII
STSEVELRIHLAIEAWIKRALSKEILSDLELVEEIKKEEERLASVYIYTVQKGDTLWKIA
KKYRTTVEKMVDFNQIDKEEIVPGQKLLIVK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaagaggtttgaaaaggttgagtacatgaacgtctacggtacagattcgcagaaa
gtgattgttgaaggagagattttgcttccagagataaaaccagacgctgtgaaagtgctt
cagactgatagcgaaattctgattacaaatgttgaagttttaaacgacaaagtgattgtt
caaggtgaaatagaattcagagtaatttatctctcatctgacccgcagaggaaagttgct
tctgtttcaagttcagcagagttttcaaagacatttgatatgttgggagtaagacctaca
atggcgtacgaggtcaaagatgatctcatttataccttttgctctcttttgagtccgcgc
aaactttctgccaaggcaattgcagagattaccgttttagtaaaagccccagctactgtt
gagtatcttgccgacattgaagaagattcaataaagtatttaaaagaaaaaatctcaatt
tcaaatcctcgtagcatgacagaggagatttcaaaaagagagattttagagattccccag
ggtaaaccttccatcagagaaatattgcgatgttttgcaaggctttcagacaggaacatc
aagtttgacaggaaaaagatgacctttgacttaaaagtggacttaaaaaccctctactca
ccagatgttggtcaaaatcctattgagatggttgaacatgaggtattaatccagcacaca
gctgaagttccagacagtcctgatgatgtagagccagttattaaattttatatcaaaagc
ttcaaagttttgcccaagactgatgaaataggtgagcttcgcaggatagagtatgatata
actattgaagctgagataacatttcatgatgtaaaaaccattgagcccattgtagatgca
tattcgacagcgtatgagataaaagattctaaaaaacttctcaacatagaacaatttgtt
gggaaagttcggcatatgcatcttttaaaagatacaattacactacctattgaacctgag
cagattttttcagtctctggcaggatagaggtggacgttataaagccagaaaagaataaa
attaacataaaaggtgttactgttgtctttttgatttatctttcaaaagaccagcaggac
atcataaaaaatacagcatcccaaattccttttgatgtgaaattggatatagaaggggta
gaagagaccgacagggcatttgcaaatattgagatagagaacatatcattttccattatt
tctacatctgaagttgaactgcggattcatcttgcaattgaggcgtggataaaaagagcg
ctctcaaaagagattttgtctgatttagagcttgtagaagagataaaaaaagaagaggag
agacttgcaagcgtctacatttatactgtccagaaaggtgatactctgtggaaaattgca
aaaaaatacagaacaacagtagaaaaaatggttgatttcaatcagatagataaagaagaa
attgtgcctggccaaaagcttttgatagtaaaatag
DBGET
integrated database retrieval system
