Caldicellulosiruptor acetigenus 6A: Calla_0418
Help
Entry
Calla_0418 CDS
T01600
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Calla_0418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clc03400
]
Calla_0418
Enzymes [BR:
clc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Calla_0418
DNA repair and recombination proteins [BR:
clc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Calla_0418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
YscO-like
DUF2959
CAP_N
Cauli_AT
FapA
DUF3958
Motif
Other DBs
NCBI-ProteinID:
AEM73079
UniProt:
G2PY59
LinkDB
All DBs
Position
480387..481751
Genome browser
AA seq
454 aa
AA seq
DB search
MMINNILSKKEWSVYELTSYLKKKVEMDVLLKSIYLKGEVIKPSVSGEHLYFELKDLEYD
AKIKCVFFWFDKSVEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQLE
EKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAVRDILNTIYTRFENIQVYIYSCSVQG
QNAPYEICEGIEYFNTAEPVEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKIPVISAVGH
ERDYVLSDFVADMRAITPTNAGEIVVSFQNQALEKLNEYQKRMKSAMEKILNMVKEKVGI
LQYKLYQNSPANTIAKRAQDISLYSHKLSFAINKKLHESHRNLKNFEKRLADRNPESRLS
VARTNFDNCSRRLGEAFKKIFQQKEFAYKVNLEKLIALNPLNVLKRGYSITLHNSKILTT
ISQVNNGDEIVTQLSDGIIKSKVFFKQEGAESDV
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgatgataaacaatatactctccaagaaagaatggagcgtttatgagcttacaagctat
ttaaaaaagaaagttgaaatggatgtgcttttgaagagcatatacctaaaaggtgaagtt
ataaaaccttcagtttcaggcgagcatctttattttgaactgaaggatttagaatatgat
gcaaagataaaatgcgtatttttttggtttgacaaaagtgtagagataaagcatggttct
aaagtactcgtaaagggcaatgtcattttttatgaaaaagaagggataattgagctaaag
gtaagcgaaatcactgatataggacttggagagctgtttgtaaaattaaagcagcttgaa
gaaaagctaagacaggaaggactctttgattcaaaatacaaaaaagaaataccgcgctat
cccaaaaaagtaggaatagtgacctcaaaaaatggtgcggcagtcagggacattcttaat
acaatttacacccggtttgaaaacattcaggtatatatttacagctgttcagttcaggga
caaaacgctccatatgagatttgcgaggggatagaatatttcaacacagcagagcctgtc
gaggttattattgtgggacgtggtggcggtgcatttgaagatttaatggcgttcaacagt
gagatggttgttagaaagatatttgaatctaaaattcctgttatatcggcagtagggcat
gagagggactatgttttgagtgactttgttgcggacatgagggctataactcccaccaat
gcaggcgaaatagtggtaagttttcagaaccaggcactggagaagctaaatgaatatcaa
aagagaatgaaaagtgcgatggaaaagatattaaatatggtcaaagagaaagtaggaata
cttcaatataaattataccaaaattcgcctgcgaataccatcgcaaaacgtgcacaggat
attagtttgtattctcacaaactttcttttgcaatcaataaaaagcttcatgaatctcat
aggaatttaaagaattttgagaagagattggcggataggaatcctgaatcaaggctttcg
gttgcgagaacaaattttgataattgtagcagaaggcttggggaagctttcaagaagatt
tttcagcaaaaagagtttgcatataaggtcaatctggaaaagttaattgccctaaatccc
ctgaatgttttaaagaggggatattctataacattacataattctaagattttgaccacc
atttcgcaggtaaataatggagatgagatagttactcagctttcagatggtataataaaa
tctaaggtgtttttcaagcaagaaggagctgaaagtgatgtgtga
DBGET
integrated database retrieval system
