Caldicellulosiruptor acetigenus 6A: Calla_0471
Help
Entry
Calla_0471 CDS
T01600
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clc03016
]
Calla_0471
Enzymes [BR:
clc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Calla_0471
Transfer RNA biogenesis [BR:
clc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Calla_0471
Prokaryotic type
Calla_0471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
UPF0150
DUF5854
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AEM73125
UniProt:
G2PYA5
LinkDB
All DBs
Position
533902..534774
Genome browser
AA seq
290 aa
AA seq
DB search
MNGVLLVDKPVGITSHDVVEFVRKVFNVKAGHAGTLDPFATGLLVILLGEATKLSSLFTS
QEKTYIATMQFGIRTDTLDITGKIKEKNNVIVEEKEIEECFKNLKGEIELDVPIFSAKKL
RGKKLYEYARKGINIEIPKVKSIIYNIEIINFSYPYLEFKVQCSHGTYIRSLAEKIAESL
STVGLLSELRRIRSGFFDLKDAVLLSDIRAESIIPVCRLFKNEIRVGRKTYKKILNGNPL
VNQDIEDIIDIDTAFADFYKIWVDKAVFIYKREKDVFKYILKVETADECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttgcttgttgacaaaccagtaggtattacctcacatgatgttgttgaa
tttgtaagaaaagtattcaatgtaaaagctgggcatgcaggaacactcgacccgtttgca
acagggcttttggtcattttgctgggggaggctacaaagctttcttctctctttacaagc
caggaaaaaacatatatagcaacaatgcagtttggtataaggaccgatacgcttgatata
actggtaaaatcaaagaaaaaaataatgtgattgttgaagaaaaagaaatagaagaatgt
tttaaaaatttaaaaggagaaattgagcttgatgttccaattttttctgcaaagaaactg
agaggtaaaaaactctatgagtatgcacgaaaaggaataaatattgaaattccaaaggtg
aagagtatcatatataatatagagataatcaacttttcatatccgtatcttgaatttaaa
gttcagtgcagccacggaacgtatataagaagtttggctgaaaagattgcagaaagtctt
tctactgtaggtctgctttctgaactaagaaggataagaagcggtttttttgatttaaaa
gatgcagtgttacttagtgatattagggcagaaagtataattcctgtgtgcaggctattt
aaaaatgagataagagtaggcagaaaaacatataagaagattttaaatggaaatccactt
gtaaaccaagacatagaagatattatagatattgacactgcatttgcagacttttataaa
atttgggttgataaggctgtctttatctacaaaagagaaaaggatgtattcaaatatatt
ttaaaggtggaaactgcagatgaatgtttatga
DBGET
integrated database retrieval system
