Caldicellulosiruptor acetigenus 6A: Calla_0474
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Entry
Calla_0474 CDS
T01600
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Calla_0474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clc03019
]
Calla_0474
03016 Transfer RNA biogenesis [BR:
clc03016
]
Calla_0474
Enzymes [BR:
clc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Calla_0474
Messenger RNA biogenesis [BR:
clc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Calla_0474
Transfer RNA biogenesis [BR:
clc03016
]
Prokaryotic type
tRNA degradation factors
Calla_0474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AEM73128
UniProt:
G2PYA8
LinkDB
All DBs
Position
536125..538230
Genome browser
AA seq
701 aa
AA seq
DB search
MESKIYKMELAGRELSFEIGKYALLANGAVLARYGDTAVLVTACASEKPREGINFFPLTV
DYEERLYSVGKIPGGFIKREGKPSEKAILSARLIDRPIRPLFPKDFYHDVSVIATVLSVD
PDNPPDVLAMLGSSVALSISDIPFEGPTGSVLVGYVDGKIVINPTAKEREVSKLHLVVSG
TKDRVMMIEAGAKEVPEDIMLEAIMTAQEEIKKIVEFIEGIVREVGKPKMEYQKRIVPDE
IKQKVREIAYDKVYQYVQIPDKIERDKKLDELKEEVFKAFEGETEETLLLVDDALYNLEK
EIVRKMIAEEGKRPDGRKFDEIRPLYAEVGILPRTHGSALFKRGYTQVLTVATLGTKGEM
QFLDGLEEEEAKRYMHHYNFPPFSTGESKPVRGPGRREIGHGALAERALEPVIPSEDEFP
YTIRLVSEVLTSNGSTSQASVCGSTLALMDAGVPIKAPVAGISIGLITKDDGSFILLTDI
QGIEDFFGDMDFKVAGTREGITAIQLDIKIHGLTKEIIEKALYQAREARLKILDFMKTVI
DKPRNELSPYAPKIFKTTVDPEKIRDIIGPGGKMINKIIAETNVKIDIEPDGRIFVAAPD
DISGNRAISMIEGIGREIEVGQFFLGKVTRTASYGAFVEIYPGKEGLVHISQLDERRLKS
VDEVVKVGDLVLVKVIGIDKLGRLSLSRKEALNVTYSRKAK
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttggagagtaaaatttacaaaatggaacttgcgggaagagagctcagctttgagattgga
aaatacgctcttttggcaaacggggctgtgcttgcaagatatggtgacacagctgtgctt
gtcactgcatgtgcttctgaaaaacccagagaaggtataaactttttcccgctcacagtt
gactatgaagaaaggttgtactctgttggtaaaattccaggtggatttataaaaagagaa
ggcaaaccctctgaaaaagcaattctttctgcaaggctaatagacagacctataagaccg
cttttcccgaaggatttttatcatgatgtctctgttatagccacagtattgtcagttgat
cctgacaatccaccggatgttctcgcaatgcttggttcatctgttgcactgtcaatctct
gatataccatttgaaggaccgactggttctgtgcttgttgggtatgtggatggaaagatt
gtcataaatccgacggcaaaagaaagagaagtgagcaagcttcaccttgttgtatcgggg
acaaaagacagagtgatgatgatagaagctggtgcgaaagaagttcccgaagatataatg
cttgaggctatcatgacagcacaggaagagataaagaagattgttgagtttattgaggga
atagtaagagaagttggaaaacctaagatggaatatcaaaagaggattgtgcctgatgag
ataaaacaaaaggtacgtgagattgcatacgacaaggtttaccagtatgtgcagataccc
gacaagattgagagggataagaagcttgatgagctcaaagaagaagtgttcaaggctttt
gaaggtgagacagaagaaactcttttacttgtagatgatgctctttataaccttgaaaaa
gagattgtcagaaaaatgattgcagaggaaggaaaacgccctgatggcagaaagtttgac
gagataagacctctttatgctgaggttggtattttgccaagaacacatggttctgcgctg
ttcaaaagaggttacactcaggttttgacagttgctactcttggtacaaaaggtgagatg
caatttttagacggtcttgaagaagaagaggcaaaaaggtatatgcatcattataacttt
ccaccattttctacaggtgaatcaaaacctgtaagaggtccaggaagaagagagatagga
catggggcattagctgaaagagcacttgaacctgttattccttcggaggatgaattccct
tacaccattcgacttgtatctgaggttttgacatctaacggttcaacgtcacaggcaagt
gtatgcggcagtactcttgcgcttatggatgctggtgtgccaattaaagcgcctgttgca
ggaatttctatcggccttattacaaaagacgacggcagttttattttacttactgacatt
caaggtatagaagacttctttggagatatggactttaaagtggcaggaaccagagaaggt
attactgccatccagcttgacataaaaatccatggacttacaaaagaaattatcgaaaag
gcactctaccaggcaagagaagcaaggcttaaaattttggattttatgaaaactgtaatt
gacaagccaagaaatgagctttcaccttatgctccaaagatattcaaaactacagttgac
cctgaaaagattagagatataattggacctggtggaaagatgataaataaaatcatcgcc
gaaacaaacgtaaagattgatatagaacccgatggaagaatatttgttgcagcacctgat
gatatctctggtaacagggcaattagcatgattgagggaattggtcgagagattgaggtt
ggtcagtttttccttggcaaggtaacaagaactgcatcgtatggtgcatttgttgaaata
tatcctggaaaagaaggacttgtgcatatatctcagttagatgagagaagattaaagtct
gtagacgaggttgtaaaagttggtgatttggtgcttgtaaaggtaatagggattgacaag
cttggcagactttcactttcacgaaaagaagcactgaacgtcacatactcaagaaaagca
aaataa
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