Caldicellulosiruptor acetigenus 6A: Calla_0650
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Entry
Calla_0650 CDS
T01600
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc03030
DNA replication
clc03430
Mismatch repair
clc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Calla_0650
03430 Mismatch repair
Calla_0650
03440 Homologous recombination
Calla_0650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clc03032
]
Calla_0650
03400 DNA repair and recombination proteins [BR:
clc03400
]
Calla_0650
Enzymes [BR:
clc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Calla_0650
DNA replication proteins [BR:
clc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Calla_0650
DNA repair and recombination proteins [BR:
clc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Calla_0650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
MCM10_OB
At5g48480-like_N
Motif
Other DBs
NCBI-ProteinID:
AEM73302
UniProt:
G2PTB1
LinkDB
All DBs
Position
709278..712700
Genome browser
AA seq
1140 aa
AA seq
DB search
MSFVHLHLHTEYSLLDGACRIDRLFERVKELNMNAVAITDHGVMYGVIDFYKAAKENGIK
PIIGCEVYLAPRTRFDKEPNIDNDIHHLILLAMDNEGYKNLSKIVSIGFVEGFYYKPRVD
REVLSKYSKGLVALTSCLAGEIPKLILREQKEKLYDAISFYKEVFGENFYFELQYHYIDE
QRFVNNELMRLSKKYKIPIVATNDVHYLRREDRNLHDILLCIQTGKTISDSNRMEFPTDE
FYLKSPEEMQQIFGYIPEALKNTLEIAEKCNVEFEFGKINLPKFQLPEGKSDAFEYLKEL
ALEGFKKRYSKDDKAAYDRLMMELQVIKDMGFVEYFLIVQDFINYAKQNNIMVGPGRGSA
AGSIVAYCLGITNVDPIKYDLLFERFLNPERVSMPDIDIDFCYQRRQEVIDYVTRKYGED
RVSQIITFGTMAARASIRDVGRVLGIPYSQVDEIAKMIPFSPGMTIDKALEINHELKKIY
EQNDTVRKIIDTARNLEGMPRHASVHAAGVVISSCPITDLVPLARTEDAIVTQFPMTTLE
ELGLLKMDFLGLRTLTVIQNTLELVKKNRGIEIDLDRIDYNDKNVYEFISEGNTNGVFQL
ESSGMKQFMKELKPENLEDIIAGISLFRPGPMDQIPVYIQNKNNREKIEYLHPSLEPILN
VTYGCIVYQEQVMQIFRTLAGYSLGRADLVRRAMAKKKADILMEEKDRFIEGAMANGVEK
ETAEKIFAIIEDFASYAFNKSHAAAYAILAYQTAYLKKYYTIEFMTSLITSVMNSNEKVG
MYIEECRKFGISILPPDINKSSYDFTIEGNSIRFGLRAIKSLGENVIAQILKEREVKGEF
KDLYDFIMRVDTNTVNKRIIENLIRSGAFDFTGINRNSLLASVEDILVLKQAKKKNANQF
SFFEISGNENESFEYKNMPQPTAQELMKMEKDTIGIYISSHPLERYTEEISKYNVTPLSE
ISTMSEEDEYKFEQILVCGILKEVKVKLTKNNQTMAFAKLEDLTDSVEVLFFPSVYEKYS
HLIKEDMIVLIEAKATFREDEGVKVIAQKVDRLGSDRPEETQNSREKALAIRVRDDTILK
SKKFLAFVKFFAGKSKIVLYYNQKRLISKSNLCIEINPTVIEQLKEWFGEENVWIEDIDS
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgttcatcttcaccttcataccgagtatagtttgttggacggagcttgtagg
attgataggctttttgaaagagtaaaagagctaaatatgaatgctgtggcaataactgac
catggagtaatgtatggtgttatagatttttataaagctgccaaggaaaatggtatcaaa
cctataattggatgtgaggtatatttagctccacggactcgctttgataaagaaccaaat
atcgataatgatatccaccaccttatccttcttgctatggacaatgagggctataaaaat
ctttccaaaatagtttcgattggatttgttgaaggattttactataaaccaagggttgac
agagaagtcttgagcaagtattcaaaagggcttgtggcacttacaagttgtcttgcgggg
gagattcccaagctgattttgagagagcaaaaggaaaaactgtatgatgcaattagtttt
tataaagaggtgtttggagagaacttttactttgaacttcaatatcattacattgatgag
cagagatttgtaaataatgaacttatgaggctatcaaaaaaatataaaattccgattgtg
gcaacaaatgatgttcattatttgaggagagaagatagaaaccttcatgatatcttgctt
tgtattcagacaggaaaaaccataagtgattctaacagaatggaatttccaacagatgaa
ttttatctcaagtcacctgaagagatgcaacagatttttggttacattccggaagcactg
aaaaacacgttggagattgctgaaaaatgcaacgttgagtttgagtttggtaagattaac
cttccgaaatttcaactgccagaaggcaaaagtgacgcatttgagtaccttaaagagttg
gctttagaaggattcaagaaaagatattcaaaagatgacaaagctgcatatgacaggctt
atgatggagcttcaagtgataaaagatatgggatttgtcgaatattttttaatagttcag
gactttataaactatgctaaacaaaacaacataatggtaggtcctggaagaggttctgca
gctgggagtattgttgcatactgtcttggtattacaaatgttgacccaataaagtatgac
cttctttttgagagatttttaaatccagaaagagtctctatgcccgacatagacatcgac
ttttgttatcaaagacgacaggaagtgattgactatgtcactcgcaaatatggagaggac
agagtaagtcagataataacatttggaacaatggcagcaagggcttcaatcagagatgtt
ggaagggtcctgggaattccatattctcaggtggacgaaattgcaaaaatgattccgttt
tctcctgggatgaccattgacaaggcacttgagataaaccatgagcttaaaaagatttat
gaacaaaatgatacggtaagaaaaataattgatacagcaagaaatcttgaaggtatgcca
agacatgcgtctgttcatgctgccggtgttgtgatttcaagctgtccaattacagatttg
gtgccgttggcaaggactgaggatgctattgtcactcaatttccaatgacaactttagaa
gaacttgggcttttgaagatggattttcttggtttgagaacactcactgtcatccaaaat
acgttggagcttgtgaaaaaaaatagaggtattgaaattgatttagacaggatagactat
aatgacaaaaatgtttatgaatttatatcagaaggaaacacgaatggtgtgttccagctt
gaaagtagtggcatgaaacagtttatgaaagaactcaaacctgaaaacttggaggatatt
attgcaggaatatctttatttaggcctggaccaatggaccagattccagtttatatccag
aacaagaataacagagaaaaaattgaatacctccatcccagccttgaaccaattttaaat
gtcacctatggatgtattgtgtatcaagaacaagttatgcaaattttccgaacacttgct
gggtactcgcttggaagagctgaccttgtgagaagagcaatggcaaagaaaaaagccgat
atactgatggaagaaaaggacagattcattgaaggagctatggcaaatggagtggaaaaa
gaaacagctgaaaagatttttgccattatagaagattttgcaagttatgcatttaacaaa
tcacatgctgctgcatatgctatattagcatatcagactgcatatttgaaaaagtattat
accatagagtttatgacaagtttaattacaagtgttatgaactcgaatgagaaggttgga
atgtatatagaagagtgcaggaaatttggaatatctattttgccacctgatataaacaaa
agtagttatgactttacaatcgaaggaaatagcataagatttggcctgagagctataaaa
agcttgggagagaacgtcattgctcaaatcttaaaagagagagaggtaaaaggtgaattt
aaggatttgtatgattttataatgagagttgacacaaatactgtaaacaaaagaataatt
gaaaatttgatacgctcgggtgcatttgactttacaggtatcaacagaaattcgctttta
gcttcagtagaagatattcttgtgctaaaacaagctaaaaagaagaatgcaaatcagttt
agtttttttgagatatccggcaatgaaaatgaaagttttgagtacaaaaatatgccacaa
ccaactgctcaggaactcatgaaaatggaaaaggatactattggaatatatataagcagt
catccacttgaaaggtatactgaggaaatttcaaaatacaatgtaactcctctttctgaa
atatctactatgtccgaagaagatgaatacaagtttgagcaaatacttgtgtgcgggata
ttaaaagaggtaaaagtaaaacttacaaagaacaaccagacaatggcatttgcaaagtta
gaagatttgacagattcggttgaggtgttgtttttcccgagcgtttatgaaaagtattct
catctaataaaagaagatatgattgtattaattgaggcaaaggcaactttcagagaggac
gagggggtaaaagttattgctcaaaaagtagataggcttggcagcgatagacctgaagaa
actcaaaacagcagagaaaaagcccttgcaataagggtaagggatgatacaatattaaag
tcaaagaaattcttagcgtttgtaaagttctttgcaggaaagtctaaaatagttctttat
tataatcaaaaaaggctaatttccaagtcaaatttgtgtatagaaataaatcctacggtg
attgaacagctcaaagaatggtttggcgaggaaaatgtttggatagaagatatagattct
tga
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