Caldicellulosiruptor acetigenus 6A: Calla_0808
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Entry
Calla_0808 CDS
T01600
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Calla_0808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clc03400
]
Calla_0808
DNA repair and recombination proteins [BR:
clc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Calla_0808
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Calla_0808
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Flavi_DEAD
Microtub_bd
Kinesin
UB2H
TFIIE-A_C
UvrD-helicase
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEM73460
UniProt:
G2PU68
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All DBs
Position
complement(865560..867545)
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AA seq
661 aa
AA seq
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MKKFKLVSDFKPTGDQPKAIEMLTEGILKGEKFQTLLGVTGSGKTFTMAKVIENVQRPTL
VLAHNKTLAAQLCSEFREFFPENAVEFFVSYYDYYQPEAYIPETDTYIEKDSSINEEIDK
LRHSATSALFERRDVIIVASVSCIYSLGSPEDYLNLTISLRPGMIKDRDEVIRELIRMQY
ERNDIDFRRGRFRVRGDVLEVFPASNTDRAIRIEFFGDEIEKITEFDVVTGEVIGRRNHV
AIFPASHYVTTAEKLKRAIKSIEEELEQRLKELRSMGKLVEAQRLEQRTRYDIEMLQEMG
FCKGIENYSRHLTGRSPGSPPYTLLDYFPKDFIMFIDESHVTIPQVRAMYNGDKARKDTL
VEYGFRLPSAYDNRPLTFEEFEEKLNQVIFVSATPGPYELKKSSRIVEQIIRPTGLVDPE
IEVHPVQGQIDHLIGEIRKRVEKNQRVLVTTLTKKMAESLTEYLKDVGIRVRYMHSDIDT
IERMQIIRDLRLGKFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVIMYADRITNAMQRAIDETNRRRKIQIEYNQKHRIIPQTVRKGIRQIIEATVS
VAEEEEKYEVVEKEIVENMTKEEIEEYIKELEQEMKKFAIELEFEKAAKVRDKIFELKKL
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttaagcttgtttcagacttcaaaccaactggcgaccagccaaaagcaata
gagatgttaacagaaggaattttaaaaggtgaaaaatttcagacccttttaggtgttaca
gggtctggcaagacattcacaatggcaaaggtcatagagaatgttcaaagaccaacgctt
gtgctggcacataacaagactttagcagcacagctttgtagtgagtttagagaatttttt
ccagaaaatgcagtagaattctttgtaagttactatgactattatcagcctgaagcttat
attccggaaactgacacgtacattgaaaaggattcatctataaatgaagagattgacaaa
ctcagacactcagctacatctgccttatttgaaagaagagatgttataattgttgcaagt
gtatcctgtatttacagtttgggcagtcctgaggattatttaaatcttactatttctttg
cgccctggcatgataaaagacagagatgaggtcataagagagcttataagaatgcagtat
gaaagaaatgacattgattttagaagaggaagatttagagtaagaggagacgtacttgaa
gttttccctgcatctaatacagacagggcgataagaatagaattttttggggatgagata
gaaaaaatcacagagtttgatgttgtaacaggtgaggtaattggtcgaagaaaccatgtt
gcaatatttccagcatctcactatgtgacaacagctgagaaattgaaaagagcgataaaa
agtatagaagaagaacttgaacaaaggctaaaagagctaagaagtatgggtaagcttgtt
gaggctcagaggcttgagcagagaacgcgctatgacatagagatgcttcaggaaatgggt
ttttgtaaagggatagagaactattcaaggcatttaactggcagatcacctggaagtcca
ccgtatactttgcttgattattttccaaaggatttcataatgttcattgatgagtcgcat
gttacaatacctcaagtaagagctatgtacaatggcgacaaagcaagaaaagataccctt
gttgaatatggttttagacttccatctgcgtatgataacagaccattgacatttgaagag
ttcgaagaaaagctcaaccaagtaatttttgtaagtgcaacacccggaccgtatgagctc
aaaaagtcttcacgcattgttgaacagattataagaccgacagggcttgttgatcctgaa
attgaggttcatcctgtacagggtcagattgaccatctgattggtgagatacgaaagaga
gtagaaaagaaccagagagtgcttgttactacccttaccaaaaagatggctgaaagtctt
actgagtatttaaaagatgtgggaatcagggtcagatatatgcattcagacatagataca
attgagcgtatgcagattatcagggatttgcgccttggcaagtttgatgtgctggtgggg
ataaatctgctcagagaaggccttgaccttcccgaggtgtcacttgttgcaattttagat
gctgacaaagaaggttttttgaggtcagagacttcgcttattcagacaattggccgcgct
gcaagaaatgttgatggaaaggttataatgtatgcagatagaattacaaacgctatgcaa
agagctattgatgagacaaaccgacgtagaaaaattcagatagaatacaaccaaaaacac
agaattatacctcaaactgtaagaaaaggcataagacagataattgaggcgacagtgtct
gtggctgaagaggaagagaaatacgaagttgtggagaaagagattgtagaaaatatgaca
aaggaagagatagaagaatatatcaaggaacttgaacaggagatgaaaaagtttgctata
gaacttgagtttgaaaaggccgcaaaagtaagggacaaaatatttgaactcaaaaaactt
ctttaa
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