Caldicellulosiruptor acetigenus 6A: Calla_0875
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Entry
Calla_0875 CDS
T01600
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clc03016
]
Calla_0875
Enzymes [BR:
clc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Calla_0875
Transfer RNA biogenesis [BR:
clc03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Calla_0875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AEM73526
UniProt:
G2PUD4
LinkDB
All DBs
Position
complement(934915..936330)
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AA seq
471 aa
AA seq
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MENKGIYYIDFGTQARFVEELEKMNTEYYLANGKNKKYHIVTYGCQMNVHDSEKLAGMLN
AMGYIETENIQEADLIIFNTCSVREHAESRVYGNIGPLKRLKDKKPDLIIGVCGCMPQQV
EVAQKLAKLFPFLDIIFGTKSLHKFPQLLYTAITEKKTVIDVSEDEDVVVEGIPTARRQG
VSAFVNIIYGCNNFCSYCIVPYVRGRERSRRPEEIIYEIEQLAQNGVKEVTLLGQNVNSY
GKDLGNGITFPKLLEKVNEIKGIERIRFVTSHPKDLSDELIVAMRDLEKVCEHIHLPVQS
GSTRILKAMNRHYTKEDYLRLVEKLKTNIPDIAITTDIIVGFPGETDEDFEDTLDVCRKV
EFDSAYTFIYSKRRGTPAEKMPNQVPDDIKHQRFQQLVKLIEEIALKKNRQMLGKTYEIL
IDGRSKRNNLLVGRTRTNKVVNVKCPEEFMFKFVNVKILEAAEHWLYGEVI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaacaaaggcatttattatatagattttggaacacaggcgcggtttgttgaagag
cttgaaaaaatgaatacagagtattaccttgcaaatggcaaaaataagaaatatcacatt
gtgacatatggctgtcagatgaacgttcatgattctgaaaaattagctggaatgctcaat
gcaatgggatacattgaaactgaaaacatccaagaagctgacttgataatatttaacacg
tgtagcgtacgagaacatgcagagtcaagagtatatggaaatattggacctttaaagaga
ttaaaggacaaaaagcctgatttgataattggtgtgtgcggatgtatgccgcagcaggtt
gaagttgcgcaaaaacttgcaaaattgttcccatttctggatataatatttggcacaaaa
agtcttcataaatttccgcaacttctttacactgctattactgagaaaaaaaccgttatt
gacgtttcggaagatgaggatgtggttgttgagggaattccaactgcaagaaggcaagga
gttagcgcgtttgtcaatataatttatggatgtaacaacttttgctcttattgcatagtt
ccatatgtcagaggaagagaaagaagcaggcgacctgaagagattatctatgaaattgaa
cagcttgctcaaaatggagtaaaagaagttactcttttggggcaaaatgttaattcatat
ggaaaagacttaggaaatggtatcactttcccgaagctacttgaaaaggtaaatgaaata
aaaggaattgagaggattagatttgtaacttctcatcccaaggatttgtcagacgagctt
attgtggctatgagggatttggagaaggtctgtgaacatatacatctgccagttcagtca
gggtcaacaaggatattgaaggctatgaacaggcactatacaaaagaagactatcttaga
ctcgttgaaaagcttaaaacaaatattcctgatatagcaattactactgacattattgta
ggttttccgggagagacggatgaagattttgaagatactcttgatgtgtgcagaaaggta
gagtttgactctgcatatacatttatctattcgaaaagaagaggaacaccagctgaaaaa
atgcccaatcaagttccagatgatataaaacaccaaagatttcaacagcttgtaaaactt
attgaagagatagctttgaaaaagaacaggcaaatgcttggcaaaacgtatgaaattctt
attgacggtcgttctaaaagaaataacttgcttgttggaagaacaagaacaaacaaggtt
gtcaatgtgaagtgtcctgaggagtttatgtttaagtttgtcaatgtaaagattttagaa
gctgcagagcattggctatacggcgaggtgatttag
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