Caldicellulosiruptor acetigenus 6A: Calla_1052
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Entry
Calla_1052 CDS
T01600
Name
(GenBank) MutS2 protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Calla_1052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clc03400
]
Calla_1052
DNA repair and recombination proteins [BR:
clc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Calla_1052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
Golgin_A5
DUF948
DUF6267
Motif
Other DBs
NCBI-ProteinID:
AEM73688
UniProt:
G2PVX0
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Position
complement(1128537..1130897)
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AA seq
786 aa
AA seq
DB search
MNQKTFRALEYDRILEMLMTAAHSEPAKRYFQNLVPSSDKDFIQKELDKVEECFIYILKY
GRLPALEFSDISLILKKARAQAILTPHEILEVEKVLKLSQEVRSYLANADSSYLKTIRER
LFNLKEIIARIDQTFLTPEEILDTASPRLKEIRDRIRRLEARIRDELNKMIRDPKIQRFL
QEPIITVRGDKLLLPVKAEHKDSIKGIIHDQSATGATLFVEPFVCVEISNQIRVARSEEK
EEIERILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRASKPILNTAGYINLK
KARHPLIEKEKVVPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGIFLPADE
GSEVCVFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEE
GAALAKAILKFLFKKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGI
PGMSNALYISSNLGLKEEIVELAKSYMSKKTLELTDIINEMERKRKELEETLENANKLKI
EAENLKKTLEEERRRFEAEKQRIKERASREAREFVQRVEDEVEKLFKELRKIAESLKEKE
MLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSFDAEGFVESLPDS
KGNLTVRIGIMKLSVNISDVFEIEEETATKNLVSSKKAVEVNQKSIDMSIDVRGKTSDDA
ILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLRRHPHVKSFRDGTYGEGEQGVT
VVELKD
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcaaaagaccttcagagctttagaatatgacaggatattagaaatgctaatgact
gcggcacattctgaacctgcaaaaaggtactttcaaaaccttgtgccctcaagcgataaa
gattttatccaaaaagaacttgacaaggttgaagagtgttttatctatatactaaaatat
ggaagactacccgcattagagttttctgatatctcattgattctgaaaaaggcaagagca
caggcaattttgacaccacacgaaatattagaagtagagaaggtattaaagctttcacaa
gaagtaaggtcatatcttgcaaatgcagatagtagctatctaaaaactattcgagagagg
ctttttaatctgaaagagattatagcccgtattgaccagacgtttttgacacctgaggag
attttagacactgcatcgccaaggctaaaagagataagagataggataagacggcttgag
gcaaggataagagatgaactgaacaaaatgataagagatcctaaaatccagaggtttttg
caagagccgattataacagttagaggcgataagcttttgcttcctgtgaaggctgaacac
aaagacagcatcaagggtattattcacgaccagtctgcaacaggtgcaacactttttgtt
gagccgtttgtgtgtgttgaaatttcaaaccagataagggttgcaaggtcagaagagaaa
gaagagattgagagaatattgcaggagctttctcagcttatttcagatagctataatgag
ataaaacaaaatttcgagagtctttctgaacttgatattctatttaccaaagcgcagtgg
gcacatcaatttcgggcttcaaagccaatcctcaacacagcaggatatattaatctcaaa
aaagcaaggcatccgctgattgaaaaagaaaaggttgtgccaattgatgtgcatttgggt
aaagaatttgacgttcttgtcatcacagggccaaacacaggtggcaagactgtgacgttg
aagaccattgggcttttctgtcttcttgctcaaagtggaatatttcttccggcagatgaa
gggtctgaggtgtgtgtattttcaaagatatttgcagatattggcgatgagcagagcata
attcagagcctttcaactttttcagcacatatgaaaaatataattgagataacacaaaat
gcggatagctcaacgcttgttcttttggacgagattggttctggcacagaccccgaagaa
ggcgctgcgcttgcaaaagcaattttaaagtttctctttaaaaaaggctctaaagttgtt
gctacaacacactatggagagcttaaaacattcgctcagcaggaagagaggtttgaaaac
gcttcttgtgagtttgatatcaatactttaaaaccaacatacaggcttttgattggaatt
cccggtatgagcaatgcgctttatatatcttccaatctgggtttgaaagaagaaatagta
gagcttgccaaaagctatatgtctaaaaagacgctggagctgactgacattataaacgag
atggaaagaaaacgaaaagaactggaagagactctggaaaatgcaaataagctaaagatt
gaggcagagaacttaaagaaaaccttggaagaagaaagaagaagatttgaagcagaaaag
caaaggataaaagaaagagcctcgagagaagcacgtgagtttgtgcaaagggttgaagat
gaggttgaaaagctattcaaagaacttaggaagattgcagagagcctaaaggaaaaagag
atgttaaaacagcttgaggagaagaagagagagtatgaaaaccttgtaaagagcatagag
caggcatcacaaaaagaggaaaaactgcagtcaaagctacctgaaaaccttcggctcggg
caaaaggtatatgtcaaaagttttgatgcagaagggtttgttgagtcactgcctgactct
aaaggaaatcttacagttagaattggcattatgaaactttctgtgaacatttcagacgtt
tttgaaatagaggaagaaacagctaccaaaaacctggtttcttctaaaaaagcggttgaa
gtcaatcaaaaaagtattgacatgtccattgatgtaaggggcaagacaagcgacgatgcc
attttagaggttgacaagtacttagatgatgcatacacagcgggactaaaacaggtgaca
ataatccatgggaaaggtacgggggttttgcgtcaggcgataaggaattttttgagacgg
catccgcatgtaaaatcattcagagacggaacatatggtgaaggtgagcagggtgtaaca
gtggttgagctgaaagactaa
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