Caldicellulosiruptor acetigenus 6A: Calla_1466 Help Entry Calla_1466        CDS       T01600                                  Name (GenBank) DNA polymerase III polC-type   KO K03763   DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] Organism clc  Caldicellulosiruptor acetigenus 6A Pathway clc03030   DNA replication clc03430   Mismatch repair clc03440   Homologous recombination Brite KEGG Orthology (KO) [BR:clc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Calla_1466    03430 Mismatch repair     Calla_1466    03440 Homologous recombination     Calla_1466  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:clc03032]     Calla_1466    03400 DNA repair and recombination proteins [BR:clc03400]     Calla_1466 Enzymes [BR:clc01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      Calla_1466 DNA replication proteins [BR:clc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     DNA polymerase III holoenzyme      Calla_1466 DNA repair and recombination proteins [BR:clc03400]  Prokaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     DNA polymerase III holoenzyme      Calla_1466 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 Rv2179c-like RNase_H_2 DEDDh_C HHH_3 DUF655 RecG_wedge tRNA_anti-codon T2SSK Motif Other DBs NCBI-ProteinID:  AEM74076 UniProt:  G2PZ31 LinkDB All DBs Position complement(1530223..1534431) Genome browser AA seq 1402 aa AA seqDB search MSEVAFLPAKPVKIEFDKSSMGLKVYVESIDNLKDIDLIGIEQRFKSLLESCKDVEIKLF KSKNLTLDELLKKYRWFLFYKISKRCNGLSHFLKDCEIVQSSNGLDFLVPNGIRDILFER KVDVLIRQILSEEFGIVCDVDFKIKDFFIQFDTDEEVEKYLRLSEEKKEEAEKITSEKSE VETDPTIIFGKKIDERKEVTPISLVKVGTDCVIEGEIFNLEIKETKNQNVLIYKLYITDY LNSTFVKIVAKKDKIPTSISVGDYVKVEGRVEFDDFEKAVVINAKNINKSQKPERLDTSS SKRVELHAHTKMSAMDAVCSAEELIKLAASMGHRAVAITDHGVVQAFPEAQEASKSCNIK VIYGMECYLIDDGVPVVYNPKEGQGFDSTFVVVDIETTGFDSQRDRIIEIGAVKIENGQI TDRFSTFVDPEGKIPVRISELTGIYQDMVDKAPKLIDAILEFERFASGSVLVAHNAQFDI GFLKKAYQECGIIFDYTYIDTLELSRRLLTDLSSYKLNKVAEFLNVELRHHHRADSDAET TAGIFISLLERLKARGYKWLKELNSIESNAKADLKSHSYHATILVKNQQGLKNLYKLVSY SHLEYFYKRPRIPKSLLIQLKDGLLIGSACESGEIFRAFLEGKSEEEIEKIAAFYDFLEI MPVENNSFLIREGYLKDEEDLREINKKIYNLGKKLGKLVVATSDAHYCHPHQRVLRQILK HNQGYNDVENDPQLYFRTTDEMLKEFEYLGKDACYEVVVENTNKIADMIEDVKPVPDETF PPKIDGAEEEIYNMTMKKAHEIYGDPLPEIVKARLEKELNSIIKNGFAVMYLIAQKLVSK SLSDGYLVGSRGSVGSSLVATMCGITEVNPLPPHYVCPNCKYSEFVTDGSVGCGYDLEDK NCPRCGEKLKKDGHDIPFETFLGFDGDKEPDIDLNFSGDYQPIAHKFTEELFGQGYVFRA GTISTVAEKTAHGFVTKYAEEKGLNLHPAEILRLSQGCTGVKRTTGQHPGGLMIVPRDKE IFDFTPIQHPADSGDKSVITTHFDYHAISGRLLKLDILGHDDPTVIRMLQDLTGVDPRSI PLDDKATMSIFTSTEALGISPEDIDCEVGTFGIPEFGTRFVRQMLIETKPKTFAELVRIS GLSHGTNVWTNNAQDLVRNGIATLKEVISTRDDIMLYLIQKGVPPKDSFRIMEDVRKGKG LKPEDEQLIREHNVPDWYIESCKKITYMFPKAHAAAYVMMAFRIAYFKVHYKEAFYATYF TVRADDFDYATILKGRDAIRQKIRDLENRISSLSQKDKNLLTVLEIANEMLARGLKFYPV DLNESDAERFIIKDGGLLIPFNALPNVGVAAAKSIVEARKEGKFLSVDDLIRRAKLNKQV IEILTQYKVLKDLPQTSQLSFF NT seq 4209 nt NT seq  +upstreamnt  +downstreamnt atgagtgaggttgcatttttgcctgcaaagcctgtcaagattgagtttgacaaatcaagt atgggtcttaaggtttatgttgagagcattgataatcttaaagatattgacctcattgga attgagcaaagattcaagtctcttttagaaagttgcaaagatgttgagataaaacttttc aaaagcaaaaacctgacgttggacgaacttttgaaaaaatatagatggtttttgttttat aaaatttcaaaaaggtgtaacggtcttagccattttttgaaagactgcgagattgtgcaa agttcaaacggcttagattttttggttccaaatggtatcagggatattctttttgaaaga aaagtagatgtgcttataaggcaaatactgtctgaagagttcggaatagtttgcgacgtg gattttaagattaaagacttttttatccagtttgacacagacgaggaagtagaaaaatat ctaaggcttagcgaggaaaagaaagaagaagctgaaaaaattacaagtgaaaagagtgag gttgagacagacccgaccattatttttgggaaaaagatagatgaaaggaaagaggtaact cctatttctcttgtcaaagttggtactgattgcgtgattgaaggtgagatttttaacctt gagataaaagagactaaaaaccagaatgtgctcatatacaagctttacatcacagactat ttaaattcaacctttgtaaagattgttgccaagaaagataaaattcctacttcaatttct gtgggagattatgttaaggtcgaaggcagggtagagtttgacgattttgaaaaagctgtt gtgataaatgctaaaaacataaacaaaagtcaaaaacctgagcggcttgatacaagcagc agtaaaagagttgaacttcacgctcacaccaaaatgtctgcaatggatgctgtgtgctct gcagaagaattaataaagttggcagcttcaatggggcatagagcagttgcgataacagac catggagttgtccaggcgtttccggaagcacaggaggccagcaaaagctgtaatatcaaa gttatctatgggatggaatgctatcttattgatgatggcgtgccagttgtttacaatcct aaggaggggcaaggatttgactctacctttgtggttgttgatattgaaacaacggggttt gacagtcaaagagatagaataatagaaattggcgctgtgaagatagaaaatggtcaaatt acagatagattttctacatttgttgaccctgaaggcaaaatccctgtgaggatatcagag ctaacaggcatctaccaggatatggttgacaaggcacccaaactcattgatgctattttg gaatttgaaaggtttgcaagtggcagcgttcttgttgcgcacaatgcgcagtttgacatt ggatttttgaaaaaggcatatcaagaatgtggaattatattcgactatacatatatcgat acgctggaactttcaagaaggcttttgacagatctgtcttcttataagttaaacaaagtg gcagagtttttaaatgtagagttgaggcatcatcacagagctgattctgacgctgaaaca acagctggtatctttatttcccttttagaaagattaaaagcaagagggtacaaatggtta aaagagcttaattcaattgagtcaaacgcaaaggcagacctcaaatctcatagttatcat gcaaccatacttgtaaagaaccagcaaggattgaaaaatctatataagctggtgtcatac tctcatttagaatacttctacaaaaggccaaggatacccaaaagtcttttgatacagtta aaggatggacttttgattggaagtgcttgtgagtctggtgaaattttcagggcctttttg gaaggaaaaagtgaggaagagatagaaaagatagcagcattttatgatttccttgagata atgcctgttgagaataattcttttttgattagagaaggatatttgaaggatgaagaagat ttaagagaaatcaataaaaagatttacaatcttggcaaaaagcttggcaaacttgttgtt gcaacatcagatgcccactactgtcatccgcaccaaagggttttgcgccagattttgaaa cacaaccagggttacaatgatgttgagaatgacccgcagctttatttcaggacaacagat gagatgctcaaagaatttgagtatctgggcaaggacgcttgttatgaagttgttgtagaa aataccaacaagattgccgacatgatagaagatgtaaaaccagtacccgatgagaccttc ccgcccaagattgatggtgctgaggaagaaatatacaacatgacaatgaagaaagctcac gaaatatatggagaccctcttccggaaattgtaaaagcacggcttgaaaaggaactaaat tcgattattaaaaatggttttgcagtgatgtatttgattgcccaaaaacttgtatctaaa tctttgtcagacggctatcttgttggttcgcgaggatctgttggttcttctcttgttgca acaatgtgtgggataacagaggtaaatccactgccgccgcattacgtttgtccaaactgc aagtattctgagtttgtaacagatggttctgttggatgtggttatgacttagaagacaaa aactgtccgcgctgcggagaaaaacttaaaaaagatgggcacgacataccgtttgagacc ttcttgggatttgatggggataaagaacctgatattgaccttaacttttctggtgattat cagccaattgcacacaagtttacagaggagctgtttggacaaggttatgttttcagagca ggtacaatctcaacagttgctgaaaagactgcgcacgggtttgtgacaaaatatgctgag gaaaaaggtttgaatcttcatcctgcagagattttgaggctttctcagggctgcacagga gtaaaaagaacaacaggccagcaccctggggggcttatgattgtcccaagagacaaggag atatttgattttacaccaatccagcatccggcagatagcggggacaaaagtgttatcaca acacactttgattatcatgctatctcaggaaggcttttaaaacttgatattcttggacac gacgacccgactgtcataagaatgctccaggacttgacaggggttgacccgcgttcaata ccgcttgacgacaaggctactatgtcaatttttacaagcacagaagctcttggaatttct ccggaggacatagattgtgaagtgggaaccttcggtataccagaattcgggacaaggttt gtaaggcagatgctaattgagacaaagccaaagacgtttgctgaacttgtgcgaatttct ggactttcgcacggtacaaatgtgtggacaaacaatgctcaggatttagtaagaaatgga attgcaacgctcaaagaggtaatttctacaagagacgacatcatgttatatttgattcaa aaaggtgttccgccaaaagatagtttcaggataatggaagatgtcagaaaaggtaaagga ttaaagccggaggatgagcagcttataagagaacacaatgttccagattggtatatagag agctgcaaaaagataacgtacatgtttccaaaagcacatgctgcagcgtatgtaatgatg gcgttcaggattgcttattttaaagtgcattacaaagaagctttctatgcaacgtatttt acagtcagagcagacgactttgattatgcaacaatcctcaagggaagagatgctataagg cagaaaataagagatttagaaaacaggataagcagcctttctcagaaagacaaaaacctt ctgacagtacttgagattgcaaacgagatgttagcacgaggtctgaagttttaccctgtt gatttgaacgagtctgatgcagagaggttcatcataaaagatggagggcttttaataccc tttaatgctctgccaaatgttggggtggcagctgcaaaaagtattgtggaggcgcgaaaa gaaggaaagtttttgtctgtggatgaccttataagacgtgcaaagctgaacaagcaggtt atagagattttgactcagtataaagtgttaaaagacttgcctcaaacaagtcagctaagc tttttctaa

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