Caldicellulosiruptor acetigenus 6A: Calla_1879
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Entry
Calla_1879 CDS
T01600
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Pathway
clc03030
DNA replication
clc03430
Mismatch repair
clc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Calla_1879
03430 Mismatch repair
Calla_1879
03440 Homologous recombination
Calla_1879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clc03032
]
Calla_1879
03400 DNA repair and recombination proteins [BR:
clc03400
]
Calla_1879
Enzymes [BR:
clc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Calla_1879
DNA replication proteins [BR:
clc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Calla_1879
DNA repair and recombination proteins [BR:
clc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Calla_1879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_22
RCF1-5-like_lid
RuvB_N
AAA_5
AAA_30
Rad17
AAA_assoc_2
TIP49
AAA_19
AAA_14
AAA_18
ORC-CDC6-like
AAA_2
AAA_24
RHSP
AAA_7
TLN1-like_RS
LysX_preATP_grasp
RNA_helicase
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AEM74459
UniProt:
G2PUI6
LinkDB
All DBs
Position
complement(1972051..1973661)
Genome browser
AA seq
536 aa
AA seq
DB search
MSMHIALYRKYRPKVFEDVVAQEHITKTLKNQIKQDKVAHAYIFCGPRGTGKTTTAKIMS
RAVNCLNPKDGNPCNECEVCRSILDEKTLDVLEIDAASNTSVNDVRQIRDEVRYPPSMCK
KKVYIIDEVHMLSTGAFNALLKTLEEPPSHALFILATTDIQKVPATILSRCQRFDFKRIS
VKDIYERLKKIVQMENISIDDNALYLISQKAEGALRDALTILERCINTSDEHITYKFVAN
LLGVTSTEIVKEFIASIVENDSNKGLKVVNRLWDEGMDVNTFLEEAVKLLRSALILRLGA
KDVLVDMLESDKDFVMNISNLIDSNRLVSIIKMLIDTANQVRWTRFPKVLLEINTIKLCD
SQFDTSFETLIERVRKLETRLSQIAENPKAFEAVKLDKASSTKQEQKTAHTADKSAEGVD
SSASFSWSEILSRWQEIKEAIKEEKPGLSHVLQNASLRFENGVKVCFKQEDSVFADVLSR
NIEYFKSVLKRIVGYEGEVSVEVEKEKPLKEDAVSDQEIINKLKDIFPDTEITIKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcacatagcactttacagaaaatacagaccaaaagtgtttgaagatgtggtt
gctcaggagcatataaccaaaacattaaaaaaccagataaaacaggacaaagtggcacac
gcgtacatcttttgcggcccgcgaggtactggcaagacaacaaccgcaaagataatgtca
agagctgtgaactgtttgaatcccaaggatggaaatccatgcaacgaatgcgaagtttgc
aggagtatcttggacgaaaagacgcttgacgttttggagattgacgctgcatcaaacaca
agtgtcaatgacgtgaggcaaatcagagacgaggtcagatacccaccttctatgtgcaaa
aagaaagtgtatataatagacgaggttcacatgctctcaacgggggctttcaacgcgctt
ttaaaaacccttgaagagcccccttcccatgcactttttattctggcaaccacagatatc
cagaaagtgcctgcaaccatcttgtccaggtgtcaaaggtttgatttcaaaaggatttct
gtaaaagacatatatgaaaggctaaaaaagattgttcagatggaaaatatatcaattgac
gataatgccctgtatttgatttcacaaaaggcagaaggtgctctgagggatgctttgacc
atattagaaaggtgcataaatacatctgatgaacatataacctacaagtttgttgcaaac
cttttgggtgttacatcaaccgagatagtaaaagagtttattgcttctattgtagaaaat
gattcaaacaaaggacttaaagtggtaaacaggctttgggatgaaggaatggatgtcaat
acctttttagaagaggctgtgaagcttttgagaagtgcacttattttgcgacttggcgca
aaagatgttttagttgacatgcttgaaagtgataaagattttgtcatgaacatctcaaac
cttattgattcaaacaggcttgtatcaattataaagatgcttattgacactgccaaccag
gtacgctggacaagatttccaaaggttttgcttgaaataaacacaataaagctttgcgac
agccagtttgacacctcatttgaaacgctcattgagagagtgcgaaaacttgagacaagg
ctatcacagattgccgaaaatcccaaagcttttgaagctgtaaagcttgacaaggcttca
tccacaaaacaagagcaaaagacagcgcatacagctgacaaaagcgcagaaggtgtagat
agcagtgcatctttttcgtggtctgagattttgagcaggtggcaggaaataaaagaggct
atcaaggaggaaaagccgggactttcacatgttcttcaaaatgccagcctgaggtttgaa
aatggtgtgaaggtatgtttcaagcaggaagatagtgtgtttgcagatgttttgagcagg
aacatagagtattttaaatcggttttgaaaagaattgtaggatatgaaggtgaggtctct
gttgaggttgaaaaggaaaagcctttgaaggaagatgctgtatctgaccaggagataata
aacaagctcaaggacatctttcctgacacagaaattactataaaagagtga
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