Caldicellulosiruptor acetigenus 6A: Calla_2051
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Entry
Calla_2051 CDS
T01600
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clc03400
]
Calla_2051
Enzymes [BR:
clc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calla_2051
DNA repair and recombination proteins [BR:
clc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Calla_2051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AEM74617
UniProt:
G2PVL7
LinkDB
All DBs
Position
complement(2150595..2153447)
Genome browser
AA seq
950 aa
AA seq
DB search
MSNIIIYTASAGCGKTENIANLYIDLINSQKALPGEIVCITYTEKAARELKNRIISKAKQ
RGLDLVTISKIQNSHIKTIHSFCMYLLRFYWAWAKVDTNFKIVPEQNRLILKLVDHYLSV
YPETLGKLSHERFFIEEYFHFAESIVQEYFNSAKYVEKACHLEDEMFHVFDYLSDRLNDQ
FLKELTYDLVLHRTFELLSIPEVNRDVKSRFKFLIVDEFQDSNFLQKSIFENIAENIYYV
GDKKQSIYRFQGAEPEVFDEAIENCSQVLELCENFRTNSELGKKIDKIATILFPNYKPLS
YKHQADGFLKVVEIVNKAREEIIQNEAIYVAKKIKEMVESGVEISVGGKPKRKVKYSDFA
VLSRKIQNIAHIYKKVFEDYDVPLDINFKRGLLEQKEIVPLLGFLEILQYPDKKSGYLRL
LANDIFKVDRFTLLFCEMSKIECYVPEDVLKFIAKQRDNLFVKKISEILYEFEDMFEYSY
KVYKFFGKGAYENVRLFYDLAEESKSFSIEDLYSYVNYQGERFSSFSSLDDSAVLISIHS
AKGLSFPIVFLVGLCESTGYFYGRSPKLRGSYDTSTREYIIAPFWMEKEYTRIKNISKQQ
EKEELKRLFYVAITRPMAGLFLINSSLREAIKKRGGAKSFGEEVGLSYILTKAEEIGIEK
EVVEIKEDEKTSQDFVSRSENNLSFALPAVILPDEFENRFRFLSPSHIMDFKRCPAMFSL
KYVMGLPVFDEQSSKEEIQQNAKVLGTTVHRVLELTSLKDIQSLDSNIALAVLENDFEDE
KIVKELILNFFESQFAKEIKDKVIKEESELPFYFKLSNQMIYGIIDKVYHLEDKIFLIDF
KTNLHFDDAKFSSYIPQLFIYTMAMKERFPQKNIFSSIFWLREGKKFDYEQKDEHLEDVI
DVIKKIRNIRTRKDVLELIEDSLDRNCNGCEYEFYCKDEQNIKLIRKKLE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatataatcatctatactgcttctgccggctgtggcaagacagaaaatatagca
aacctttatatagaccttataaattcccaaaaggctttaccaggtgaaattgtctgcata
acatacactgaaaaagcagcaagagagcttaaaaacagaataatctcaaaagcaaagcaa
agagggcttgatttggtcacaatttcgaaaattcaaaattctcatattaaaaccatacac
tcattttgtatgtatcttttaagattttactgggcatgggcgaaggttgacacaaacttt
aaaattgtccctgaacagaataggctaatactaaagcttgtggaccattatctttcagtt
tatcctgaaactttggggaaactgtcacatgagaggtttttcattgaagagtattttcac
tttgcagaaagtattgtacaggagtattttaattcagcaaagtatgttgaaaaagcttgc
caccttgaagatgaaatgtttcatgttttcgattacttatcagacaggttaaatgaccag
tttttaaaagaactcacatacgatttggttttgcataggacttttgaacttttaagcatt
ccagaagtaaatagagatgtaaagagcagatttaaattcttgattgttgacgagtttcaa
gattcaaactttttacaaaaatcaatctttgaaaatatagctgaaaacatttattatgtt
ggagataaaaagcagtccatttaccgtttccagggtgcagagccagaggtttttgatgaa
gctatagaaaactgcagccaagttttagagctctgtgaaaactttagaacaaactcagaa
cttggcaaaaagatagataaaattgccacaatactttttccaaactacaaaccactttct
tacaagcatcaagctgacggatttttaaaagttgtggagattgtaaataaagcaagagaa
gagattattcaaaatgaagctatttatgttgcaaaaaagataaaagagatggttgaaagt
ggtgttgagataagtgtgggcggcaagccgaaaagaaaggtgaaatattctgactttgca
gtgctttcacgaaagattcaaaatattgctcatatttacaaaaaggtgtttgaagattat
gatgttccgcttgatattaattttaaaagagggcttttggagcaaaaagagatagtgccg
cttttgggctttcttgagattttgcaatatccagacaaaaaatctgggtacttaagactt
cttgcaaatgacatatttaaagtggacagatttacgcttctcttttgcgagatgagcaaa
atagaatgttatgttccagaagatgttttaaagttcattgcaaaacagcgtgataatctg
tttgtgaaaaagatttcagagattttgtatgagtttgaagatatgttcgaatatagttac
aaggtctataagttttttggcaagggtgcatacgaaaatgtcagacttttttacgacttg
gcagaagagagcaaaagcttttcgatagaagatctttacagttatgtaaattatcaaggc
gaaaggttttcgagcttttcttctcttgatgacagtgcagtgcttatcagcatacattca
gcaaaaggactcagctttccaatagtgtttttggtcggactttgtgaaagcacgggttat
ttttatggcagaagcccaaagctgagaggttcttatgacacaagcacaagagaatatata
attgctcctttttggatggaaaaagaatatacaagaataaagaatatatcaaaacagcag
gaaaaagaagagcttaaaaggcttttttatgttgccataacaagaccgatggcagggctt
ttcttgataaactcaagcttaagagaagctataaagaaaagagggggagcaaagtcgttt
ggtgaagaggtgggtttgagttatattctcacaaaagctgaggagattggaattgaaaaa
gaagttgtggagataaaagaggatgaaaaaacatcgcaggattttgtctcaagatcagaa
aataacctatcttttgctttgcctgctgtgattttgcctgacgagtttgaaaacaggttt
aggtttttgtcaccatcgcacataatggattttaaaagatgccctgccatgttttcacta
aagtatgtaatgggtcttccagtttttgatgaacaaagctcaaaagaggagatacagcaa
aatgcaaaagtgcttggcacaaccgttcacagagttttggaactcacaagcttgaaagat
attcaaagcttagatagcaacattgccttagccgtgcttgaaaatgactttgaggatgaa
aagattgtgaaagagcttatcttaaacttttttgaaagccagtttgcaaaggaaatcaaa
gataaagtgataaaagaggaaagtgagcttccgttttattttaaacttagcaatcaaatg
atatatggcataattgacaaggtgtaccatcttgaagataagatttttctcatcgacttt
aaaacaaaccttcattttgatgatgcaaagtttagtagttacatcccccagcttttcatt
tacacaatggcaatgaaagaaagatttccacagaaaaatattttttcttctatcttctgg
ttaagagaagggaaaaagtttgactatgagcaaaaagatgaacaccttgaagatgtaatt
gatgtgataaagaaaataaggaatatcagaaccagaaaggatgtacttgagcttattgaa
gattctttagatagaaattgcaatggctgtgaatatgaattttactgtaaggatgagcaa
aatattaaattgataaggaaaaagcttgaatag
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