Caldicellulosiruptor acetigenus 6A: Calla_2467
Help
Entry
Calla_2467 CDS
T01600
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC and periplasmic sensors
Organism
clc
Caldicellulosiruptor acetigenus 6A
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
SBP_bac_3
PAS
PAS_9
PAS_4
PAS_11
PAS_8
Diguanyl_cycl_sensor
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
AEM74993
UniProt:
G2PZ81
LinkDB
All DBs
Position
complement(2646278..2649328)
Genome browser
AA seq
1016 aa
AA seq
DB search
MKRIRMLVNTVLAVIIIFFLSPAYAGHTPVKFEVDKSYPPFSYTSGGRIYGFTIDLANLV
FEPDKFKLALSSDTWNQVYKKLVEGKIDVAAPVAIVEERKKEVYFSKPIFTRHVGLYTSK
EFSKNITLKNLEDFKVGVMQSDYTETLLKEKLGVNRYYTYPTIEDLIYALVDGKIDAALM
SQEIANYFLVKNGLRDRAELKIKNIFTVKSAFAVSKKRPELVAYINQRLNFLTNKGIFDE
LYYNYFSTYSPEYYERKNRQIVISSLYLLLIILFAASVAIFVMTRINRRLEHGKQAYEKY
AQLLAENANAIVLTLNLNGEIIYFNKFAQELTGYKSEEVVGKKWVDIFIPPHRREYIENL
FKRIAEEKILNNHENEIVTKDGDIKWILWNNTLIESPYLNEPMIISTGLDITQIKTTQQL
LQQSYKKIERTNQELLNTLEILNRQSKALEEEKEKYKFLIENGSDCIWEIDFKEKNIEFY
GRLKDLFDIKAVKSKNDFSAWLDFFHPDDRSTVFKKLQDAILLHEENLEFEARIRDKNGN
WHWMSAHVQIFYNEEGKPEKIIAVNIDWTAKKEYEQKIEYIAYYDALTSLPNRKLFEEVL
EDFIKKAEEEKAQGAVILIDIDNFKDINDLYGHEAGDEYLKAVCQKVLEYLKSLNLNTFF
ARVGGDEFAVVLHGLAKKEEVIEVCTHLLNIFESEIYIEKLERDLFASASMGISFYPDDG
RSVKEIFRNVDMALSSAKENGKNDFQIFLPFMLTKNLKKIEIEKGLKKAIETDQFELYYQ
PVINLKDMEIHSVEALLRWISPEKGMISPLEFIPVAEESGLIVKIGEMVIEKAFSDLKEW
EKKGIDYLHMAINLSARQFKTKFFENMVQKLIERYSIDPKKISFEITETGAVENFDVSLK
ILSFLCQMGIKFLIDDFGTGYSSLIYLKRLPIGGVKIDRSFISELEVSKENKAIVEGIIL
MAHKIDLKVVAEGVETKRQLEILKEVGCDLAQGYLFSKPLPKAEVEKLLIARKITV
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaattagaatgttagtaaatacagttttagctgtaattataatcttcttttta
tcccctgcatatgccggtcatacaccggtgaaatttgaggttgacaaaagctatccaccg
ttttcgtatacatcaggtggtcgaatctatgggtttaccattgaccttgcaaaccttgtg
tttgagcctgacaagtttaaacttgcgctttcaagcgatacatggaatcaagtttacaaa
aaacttgtcgaagggaaaattgatgtcgcagcccctgttgccatagttgaagagagaaag
aaagaggtgtatttttcaaaaccaatatttacacgccatgtgggactttatacatccaaa
gaattttcgaaaaatataacgcttaaaaaccttgaggatttcaaggtaggagttatgcaa
tctgattacacagaaacccttttaaaagaaaagctgggcgtaaatagatattatacgtac
cctacaattgaagatttgatttacgccttggtggatggaaagattgatgctgccttgatg
tcccaggaaatagccaattactttcttgtcaaaaatggcctgagagacagggcagagctc
aaaatcaaaaacatctttactgtaaaaagtgcatttgctgtgagcaagaaaagaccagag
cttgttgcgtacataaaccagaggttaaattttcttacaaacaaaggtatatttgatgag
ctttactataactacttttctacatattcacctgaatattatgagagaaaaaataggcaa
atagtaatttcttccctatatcttttgctcataatactttttgctgcatctgtggcaata
tttgtaatgacaagaataaatagaaggcttgaacatggcaaacaggcgtatgaaaagtat
gcccagcttcttgcagaaaatgcaaatgccattgtactaactcttaacttaaatggcgag
ataatttattttaacaagtttgctcaggagctcacaggctacaaaagtgaagaggttgtg
ggcaaaaagtgggttgatatttttatcccaccgcacaggcgtgaatatatagaaaatctt
tttaagagaatagccgaagaaaaaattttaaataaccacgaaaatgagattgtaacaaaa
gatggcgatataaaatggattttgtggaacaataccctcatcgaaagcccatacttaaac
gaacctatgattatttcaacagggcttgatataacgcaaataaagacaactcagcagctt
ttacagcaaagctataaaaagattgaacggactaatcaagagcttttgaataccttagag
attttaaacaggcaatctaaagccttagaggaggaaaaggaaaagtacaaatttttaata
gaaaacgggtcggattgcatctgggagatagattttaaagaaaaaaatatcgagttttat
ggaagactcaaggacttgttcgacattaaagctgtgaagtcaaaaaatgatttttcagcc
tggcttgattttttccatcctgacgacagaagcactgtattcaaaaaattgcaggatgct
atacttcttcatgaagaaaatttagaatttgaagcgcgcatacgggacaaaaacggaaac
tggcactggatgtccgctcatgttcagattttttacaatgaagaaggcaaacctgagaag
attattgcagtaaacattgactggacagcaaaaaaagagtatgagcaaaaaatagaatac
attgcttactatgatgctctgaccagcctgccaaacaggaaactatttgaagaggttctg
gaagattttatcaagaaagctgaagaagaaaaagctcaaggagctgtaatactcatagac
attgacaatttcaaagacataaacgacctttacgggcatgaggcaggagatgagtatcta
aaagctgtgtgtcaaaaagtattagagtatctcaaaagcttaaatctgaatacatttttt
gcaagagttggcggtgatgagtttgcagtagttttgcacggtcttgccaaaaaggaagag
gtaattgaggtttgcactcatcttcttaacatctttgaaagtgaaatttatatagaaaag
ctggaaagagacctttttgcctcagcatcaatgggcatatccttctatcctgacgatggc
agaagcgtcaaggaaatattcagaaatgttgacatggcactgtcttctgcaaaggaaaac
ggcaagaacgattttcagatttttttgcctttcatgttaacgaaaaatcttaaaaagatt
gaaattgaaaagggtctcaaaaaagccattgaaactgaccagtttgagctttattatcag
cctgttataaacttaaaggatatggaaattcattctgtggaagcgcttttgcgatggatt
tcacctgaaaagggtatgatatcaccccttgaatttattcctgttgccgaagagagcggg
cttatagtaaaaattggagagatggtcatagaaaaggctttttcggacctcaaagagtgg
gagaaaaagggcattgactatctgcacatggcgataaatctttcagcacggcagtttaaa
actaagttttttgagaacatggttcaaaagctcattgaacgatatagcattgacccgaaa
aagatttcatttgaaataacagaaacaggtgctgttgaaaactttgatgtgtcgctcaag
attttaagttttctatgccagatgggaataaagttcttgatagacgattttggcactgga
tattcgtcactgatttatttaaaaagacttccaattggcggtgtgaagatagacagaagt
tttatatcagagcttgaagtgtcaaaagagaacaaggcaattgttgaaggtatcatcttg
atggcgcacaagattgacctcaaagttgtagcagagggcgttgagacaaaaagacagctt
gagattttaaaagaagtaggatgtgaccttgcacaagggtatttattttcaaaacccctg
ccaaaagctgaggttgaaaaacttttgatagcaaggaaaataactgtctaa
DBGET
integrated database retrieval system
