Clostridium sporogenes: CLSPO_c02560
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Entry
CLSPO_c02560 CDS
T03905
Symbol
rpoN
Name
(GenBank) putative RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
cld
Clostridium sporogenes
Pathway
cld02020
Two-component system
cld02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLSPO_c02560 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CLSPO_c02560 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cld03021
]
CLSPO_c02560 (rpoN)
Transcription machinery [BR:
cld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CLSPO_c02560 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_Crp_2
Sigma70_r4
HTH_38
WHD_RNase_R
HTH_21
HTH_IclR
HTH_3
Cro
HTH_17
Phage_CII
Sigma70_r4_2
HTH_36
MarR
HTH_5
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AKC60987
UniProt:
A0A7X5SXN8
LinkDB
All DBs
Position
262749..264122
Genome browser
AA seq
457 aa
AA seq
DB search
MNMNFGLSLTQEQKLIMTQQMQLSIKLLQMSTYELQQYVEKEVQENPVLDSQNTDKEDKI
IEDINYKKLIKHLEDNGNEYGNYSSYNKEEETSPFNFISNEKSLKEYLQEQIIELNENKY
IKSICIYIIENIDDKGYLSVNDEEISEELKVPLDSIKEAIDIVQSLEPDGIGARNLKECL
KIQLKKKSINNIKICEIIDNYLPLVAENRYNVISKKLGISIKKAQEYGDVIKTLQPKPSR
GFYTGDEVKYIVPDAYIKKIDNEYYIIMNEELLPKLTVNNLYKEIVLNDTDENAVEFVKE
KLNSAIFLIKSIENRKSTIYRVLEKILEIQKDYFDFGIEFLKPMTLREIADSLGMHESTI
SRAIRDKYINTNRGTILIKDLFTTGITANNSTGEDISVEFIKKEIKELIDKEDKKKPISD
QIICNILNNKGIQISRRTVAKYREELGIQSSKCRKRF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaattttggcttatccttaacacaggaacaaaagttaataatgacacaacaa
atgcagttatctattaaacttcttcagatgtctacctatgaattgcaacaatatgttgaa
aaggaagttcaagaaaatcctgttttagattctcagaatactgataaagaagataagatt
atagaggatataaactataaaaaattaattaaacatttagaggataatggaaatgaatat
ggtaattatagtagctacaataaagaagaagaaacctcaccttttaattttatatccaat
gaaaaatcattaaaagaatacttacaagagcaaattatagaattaaatgaaaacaaatac
ataaagtccatatgcatatacataatagaaaacatagatgataaaggatatttatctgta
aacgatgaggaaatatctgaggaattaaaagttccactagattcaataaaagaagccata
gatatagtacagtcattagaaccagatggtataggtgctaggaatttaaaagaatgttta
aagatacaattaaaaaagaaatccataaataatatcaagatatgtgaaattatagacaat
tatcttcctttagtagcagagaatagatataatgttatatctaaaaaacttggtatatca
ataaaaaaggcccaggaatatggagatgttataaaaactcttcagcctaaaccttcaaga
ggattttatactggtgatgaagtaaaatatatagttccagatgcatatataaaaaaaata
gataacgaatactatataattatgaatgaagaactattacctaagttaacagtaaataat
ttatataaagagatagttttaaatgatacagatgaaaatgcagtagaatttgtaaaagaa
aaattaaatagtgccatttttttaattaaaagtatagagaatagaaaatctacaatttat
agagtattagaaaaaattttagaaatacaaaaggattattttgattttggaattgagttt
ttgaaaccaatgactttaagggaaatagctgatagtttaggtatgcatgagtctactata
agtagagctataagagataaatatataaatactaatagaggtaccatacttataaaagat
ttatttactacgggaattactgctaataatagtacaggggaagatatttctgtagaattt
ataaaaaaagaaataaaagaattaatagataaagaagataagaaaaagcctatatctgat
caaataatatgtaatatattaaataataagggcatacaaatatcgagaagaactgtggct
aaatacagagaagagttaggtatacaatcttcaaaatgtagaaagcgtttttaa
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