Clostridium sporogenes: CLSPO_c05060
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Entry
CLSPO_c05060 CDS
T03905
Symbol
sbcD
Name
(GenBank) exoribonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cld
Clostridium sporogenes
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c05060 (sbcD)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLSPO_c05060 (sbcD)
Archaeal homologous recombinant proteins
CLSPO_c05060 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AKC61230
UniProt:
A0A7U4XSZ1
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Position
556186..557415
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AA seq
409 aa
AA seq
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MRILHTSDWHLGKNLEGFSRMDEQERFIEDFINIVDKNNIDMVIIAGDIYDNGNPPARAE
KMFYDCIKKVSNKGERLVLIIAGNHDNPERLVAASPLAYDEGIILMGTPKTIVPKGKYGE
FKVINSDLACLEIEVKGERAVIISLPYPSEKRLNEILSKEMDNDEDRRKTYSERIGEIFS
NLQEKYYKDDTVNLAISHIFVDGSEETDSERPIQLGGSLAVDADKLPKKAQYIGLGHLHK
PQKVRGLGNAYYSGSPLPYSKSERGYSKGCKIIDVHPGEKAIIEDVYFNNYKPIEVWSCN
GIEEAINKCEENKEKDMWLYLHIKTKEYISTEDIKILKEIKKDIVEIVPEIEEKGEETFN
ETIKEKSMAELFRSFYLNQRGIEASEELMDLFLSIAQEEDEYETKETCD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattacatacctccgattggcatttaggaaagaatcttgaaggttttagtaga
atggatgaacaggaaagatttatagaggattttattaacattgtggataaaaataatata
gatatggtgataatagctggggatatatatgataatgggaatccgccagctagagcagaa
aaaatgttttatgattgtataaaaaaagtaagcaataagggagaaagattagttttaatt
atagcagggaatcacgataatccagaaagactagttgctgcaagtcctttggcttatgat
gagggaataatacttatgggtacccctaaaaccatagttccaaagggaaagtatggggag
tttaaggtaataaattcagatttagcctgtttagaaatagaggtaaagggagaaagggca
gtaattatatctttaccttaccctagcgaaaaaagattaaatgagatattgtctaaagaa
atggacaatgatgaggatagaagaaaaacttattcagaaagaataggagaaatattttct
aatttacaagaaaaatattataaagatgacactgttaatttagctatttctcatatattt
gtagatggatcagaggaaacagattctgagaggccaatacaacttggaggaagtttagca
gtagatgcagacaagttacctaaaaaagctcaatatataggccttggacatcttcataaa
ccacaaaaggtaaggggattaggtaatgcatattattctggttcaccactgccctatagt
aaaagtgagagaggatatagtaaagggtgtaagataatagatgtacatccaggagaaaaa
gctattattgaagatgtttattttaacaactataaacctatagaggtgtggagttgtaat
ggaatagaagaggctataaataaatgtgaagaaaataaagaaaaggatatgtggctatat
ttacatataaaaacaaaggaatatataagtacagaagatataaaaattttaaaagaaata
aaaaaagatatagtggagatagtgccagagatagaggaaaaaggagaagaaacttttaat
gaaactataaaagaaaagtctatggcagaattatttagatccttttatttaaatcaaaga
ggaatagaggctagtgaagaattaatggatttatttttaagtatagctcaagaggaggat
gaatatgaaaccaaagaaacttgtgattaa
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