Clostridium sporogenes: CLSPO_c05070
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Entry
CLSPO_c05070 CDS
T03905
Symbol
sbcC
Name
(GenBank) exoribonuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cld
Clostridium sporogenes
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c05070 (sbcC)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLSPO_c05070 (sbcC)
Archaeal homologous recombinant proteins
CLSPO_c05070 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ATP_bind_1
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKC61231
UniProt:
A0A7U5D235
LinkDB
All DBs
Position
557390..560920
Genome browser
AA seq
1176 aa
AA seq
DB search
MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIARDS
TQFINLDTDSLFVSYEFQIASADEREDYIVSRTVKRDKKGGYKTTAARLVKNGEEEEEII
ADKPRDIEKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIFGLEKYGKK
LSERIRKARNKQLSSLTLIEGRLEQYKDISKEKLQELNIQYENLLKEKSRISKEKEESNK
LYEKYKNIWELQEELDIYLNRLEKLKKGLLDIEGKKVKVEKGKNALNIKPYIDEINKIEE
DRNINEKELNIAIEQLKNIDLNLKNLEDEYKKASKDKEEKIPLLMQKENNLLQAIEINKK
IEIIKREKATLVQKYKEKDASIKNKNIEKRNTEDNINKISEEIKLKEEEINFLKIDGDRR
EKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLEEYELKYKDTLETQKDINKKLEYVLD
KREDLIKNSPGNNDILLDKKDYINKLSETFNNLNKINDKKQELEKNLKEKQVVKLNLEKQ
YKEILEIVKSREETVVILEEKIKNIEKMDMASILAANLKEQEPCPVCGSMHHIKLAKKVD
IKELEILKEEHGNILKELENIRIEENKKNILLISIKKEEELILEELENLKKQLKNINLQD
LRGELQKEKNDFHKLNENIKFWEEEKLILEENINKLQKEKNHIDKEEAKKNEAISKEKEL
IASIKKDREEKEILFKEKEKEHTNLKEEIKVSNVEEEINKIRVCDKKVEECNRVIKNKRE
VLDTENKKREEIIKQINTMEIELGKIIEAGKEKKNFIDKEEEEIKKLNVGEISKEHLDEV
KKSIENIKGKEETLKSKLELEGKNREVLWENKISKEQIKINLEKLYNERFIQLNKALEEN
KFHTLEDAKLMLICKEEIKEFEREIEEFEKEYNNLNMNIERVNNKLKGERIEEERWKDIR
LKKENKEKELEDIIKNIVIEEKLISDMESNIKALKELLDEKEKVSHKKALLEDIDKLVQG
NKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMRDDFNGGGIRPTNTLSG
GETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSELLDTVMTSLENLRSDRLSV
GIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaaagaaacttgtgattaaagggctaaatagttttatagaaaaacaagaaata
gattttgaaactttagttaatagaggtttgtttggtatatttggacctacaggcagtgga
aaatctagtatattagatgcaataactatggctttgtacggagacatagcaagagatagt
actcaatttataaatttagatacagattctttatttgtaagctatgagtttcagatagcc
tcagcggatgaaagagaagattatattgtttctagaacagtaaagagagataaaaaaggt
ggttataagaccactgcagctaggttagttaaaaatggtgaagaggaagaagaaataata
gcagataagcctagggatatagaaaaaaatatagaatctataatagggttaacagcagaa
gattttactcgttccgtagttttacctcaaggtaaatttagtgaatttttaaagctaagt
ggtaaaagtagaagagatatgttagagagaatatttggactagaaaagtatggtaaaaaa
ctttcagaaagaataagaaaagcaagaaacaagcaattatcctctttaacactaatagaa
ggtagattagaacagtataaagatatatctaaagaaaaattacaggaactaaatatacaa
tatgaaaatttgttaaaagaaaaatctagaatatcaaaggaaaaagaagaaagcaataaa
ctttatgaaaagtataaaaatatatgggaacttcaagaagagttagatatttatttaaat
agattagaaaagcttaaaaaaggcttattggatattgaagggaaaaaagtaaaagtagaa
aagggaaagaacgcgttaaatattaaaccctatatagatgagattaacaaaattgaagaa
gatagaaatataaatgaaaaggaattaaatattgcaatagagcagttaaaaaatatagat
ttaaatttaaaaaatttagaggatgaatataagaaagcatcaaaggataaagaagaaaaa
atccctttattaatgcaaaaagaaaataatttactacaggctatagaaataaataagaag
attgaaattataaagagagaaaaggcaactttagtacaaaaatataaagaaaaagatgct
tcaataaaaaataaaaatatagagaaaagaaatacagaagataatataaataaaatttct
gaggaaataaaattaaaagaagaagaaataaatttcttaaaaatagatggggacagaaga
gagaagatacaaaaactatatgaaatagataaagaatataaaagattaaatttagaagtt
tgcaatataacagaaagaataaatataaaaataaaaagcctagaagagtatgaattaaag
tataaagatacattggaaacacagaaggatataaataaaaaattagaatatgttttagac
aaaagagaagatttaataaaaaattctcctggtaataatgatattttgcttgataaaaaa
gattatataaataaattaagtgaaacatttaataatttaaataaaataaatgataaaaag
caggaattagaaaagaatttgaaagaaaagcaagtagtaaaattaaatctagaaaaacag
tataaagaaatattagaaatagtaaagtccagagaagaaacagttgtgattttagaggaa
aaaataaagaatatagaaaaaatggatatggcctctatattagctgctaatttaaaggag
caggaaccttgtcctgtatgtggatctatgcatcatattaaattagccaaaaaggttgat
ataaaagaattagaaattttaaaagaagaacatggaaatatattaaaagaactagaaaat
ataagaatagaggaaaataaaaaaaatatacttttaatttccataaaaaaagaagaagag
ttaatattagaggaattagaaaatttaaaaaagcaattaaagaatataaatttacaggat
ttaagaggagaattacaaaaagaaaaaaatgattttcacaaattaaatgaaaacataaag
ttctgggaagaagaaaaactaatattagaagaaaatataaacaagctccaaaaagaaaaa
aaccatatagataaagaagaagctaaaaaaaatgaagctatatcaaaggaaaaagaatta
atagcttctataaaaaaggatagagaagaaaaagaaatattatttaaggaaaaagaaaaa
gagcatacaaatttaaaagaagaaattaaagtatctaatgtggaagaagaaataaataaa
attagagtttgtgataaaaaagtagaggaatgtaacagagttataaaaaacaaaagagaa
gttttagatactgaaaataaaaaaagagaagagataattaaacagataaatactatggaa
atagaattaggaaaaataatagaagcgggaaaagaaaagaaaaattttatagataaagaa
gaggaagaaataaaaaaattaaatgtaggagagatttctaaggaacatttagatgaggta
aaaaaatctatagagaatataaagggaaaagaagaaactttaaaatctaagttagagtta
gaaggtaaaaatagagaagtattatgggaaaataaaataagtaaggaacaaataaaaatt
aacttagaaaaactctataatgaaagatttattcagttaaataaagcattagaggaaaat
aaattccatactttagaagatgcaaaattaatgttaatatgtaaagaagaaataaaagaa
tttgaaagagaaatagaggaatttgaaaaagagtataataatttaaatatgaatatagaa
agagtaaataacaaattgaagggggaaaggatagaggaagaaagatggaaggatataagg
cttaaaaaagaaaataaggaaaaagaactagaggatataattaaaaacattgtaatagaa
gagaaacttataagtgatatggaaagtaatataaaggcactaaaggaactattagatgaa
aaagaaaaggtgtctcataaaaaagctttgttagaagatatagataaattagttcaggga
aataaatttgtagaatttgtagctatgaatcagttagaatatatagtttttgaagcttct
aaaagacttaaggatataactagaggaagatatgcattagaattagattgtaatggaaac
tttactatgagggatgattttaatgggggtggtataagacctacaaatactttgtctggt
ggggaaaccttcttaacatcattggccctagctttggcgctgtcttcacagatacaacta
aaaggaagctcccctttagaatttttctttttagatgagggatttggcactttagatagt
gagcttttagatacagttatgacttctttagaaaatttaagaagtgatagattaagtgta
ggaataataagtcatgtagaggaacttaaaaatagagtaccaataaaacttatagtagat
cctgcggtgccaggagagggtggaagtaaaataaaaatagagtatagctaa
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