Clostridium sporogenes: CLSPO_c13400
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Entry
CLSPO_c13400 CDS
T03905
Symbol
pcrA1
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cld
Clostridium sporogenes
Pathway
cld03420
Nucleotide excision repair
cld03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLSPO_c13400 (pcrA1)
03430 Mismatch repair
CLSPO_c13400 (pcrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c13400 (pcrA1)
Enzymes [BR:
cld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLSPO_c13400 (pcrA1)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSPO_c13400 (pcrA1)
MMR (mismatch excision repair)
Other MMR factors
CLSPO_c13400 (pcrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
Rv2179c-like
AAA_12
DEDDh_C
AAA_11
DEAD
DUF3127
Pox_A3L
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKC62060
UniProt:
A0A7U4LMJ0
LinkDB
All DBs
Position
1462193..1464760
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AA seq
855 aa
AA seq
DB search
MLDIDFNHKQQKIINTLDKNILLLSSAGTGKTKTLSSRIGNIIDKSLASGDEILCLTFTN
RACKEMKEKIIETVGKEGLKVTVKTFHSFCFDVIKKEAKKNTDISFNFTIYDEEDTKEII
SELNPYKFNVTCLQRFINIVKEKSINYKERDYKDVIDTMIKYNPNIFNDICKNQKYMVDK
TLVDYLKIYGYLMVISYDKKLYERHGLDFNDLIIKVYDLFQKDSITTYWREKYKFIHIDE
VQDTSEVEYNIVSKLFKNNNIMISGDYYQTIYEWRGSNPSIIFDRYRKGYNPEFIVFDKN
YRSSEILLKASYEFLINAFGKGVNEIYKEGIEPKANIKGDLIEFKKAYDFMEEASFIFNK
IKSLNLENLSRVAILTRNNRINIALSEKFKILNSKLPKEERIGFLLVDEFKFFRRGEIKD
VLAYLKLMVNDFDNNSLKRILKKFGKGIGEKTIEEIEKEENIKIGVRLTDLIHKNTQEYG
DYYELLTRELDNENVVVFDVESTGINITKDEIVQIAGIKINNKGEVTEKFERFLTPEKSV
GDSYLVHGFSDQFLKEKGEDKERVLKEFLEFVKGTVLIGHNVTFDITILNSELQRLDLEK
ANFKAYYDTLDIARRFYPSLTNHKLETLSKLFNTETKSSHDAMDDILATKDVLMVMLKEK
VEPTIINRMAVYGKYIKKFEPIYKEITNLKELSYIKSPKDIIGEIVNKTKIKEIYKYQHT
KINNLREFFVIAKEIENKETCPRDNLIEFLKITSLSNSELDRMLTKYPRVPIITVHQAKG
SEFDYVFLAGLQNNTFPNYMAIKEGNEMEEKRLFYVAITRAKKSLYLSFSEYEHNRRKAK
SMLIDYIPKDYLKYI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgttagatatagattttaatcataaacagcaaaagataataaatacattagataaaaat
atacttcttttgtcttctgcaggtacaggaaaaacaaaaacattaagtagtagaatagga
aatataatagataaaagtttagcttcaggagatgaaatactttgtttaacttttactaac
agagcctgcaaggaaatgaaagaaaaaataatagaaacagtaggaaaagaaggattaaaa
gttactgtaaagacttttcatagtttttgttttgatgtaataaaaaaggaagcaaaaaag
aatacggatatttcctttaattttactatatatgatgaagaagatacaaaggaaataata
agtgaattaaatccatataaatttaatgtgacctgtcttcaaagatttataaatattgtt
aaagaaaaaagtataaattataaagagagggattataaagatgttatagacactatgata
aaatataatccaaatatatttaatgatatatgtaagaatcaaaaatatatggtagataaa
accttagtagattatttgaaaatatatggatatttaatggtaataagttatgataaaaag
ctatatgaaaggcatggattggattttaatgacttaataataaaagtttatgacttattt
caaaaggatagtataactacatattggagagaaaaatataaatttattcatatagatgag
gtacaggatactagtgaagtagaatataatatagtttcaaaactatttaaaaacaataat
ataatgattagtggtgattattatcagactatatatgaatggagaggatctaatccatca
ataatatttgataggtatagaaaaggatataatccagaatttatagtttttgataagaac
tatagatcttcagaaatattattaaaagcgtcttatgaatttttaataaatgcttttgga
aagggcgtaaatgaaatatataaagaaggtatagagcctaaagctaatataaaaggggat
ttaatagaatttaagaaagcgtatgattttatggaagaggcatctttcatatttaataaa
ataaaatctttaaacctagagaatctttcaagagttgctatattaactagaaacaataga
ataaatatagctttaagtgaaaaatttaaaatattaaattcaaagcttccaaaagaagag
agaatagggtttctcttagtggatgaatttaagttctttagaagaggggaaataaaggat
gtattagcttatttaaaacttatggtaaatgattttgataataatagtttaaaaaggata
ttaaaaaaatttggaaagggaataggagaaaagaccatagaagagatagaaaaagaagaa
aatataaaaataggtgtaaggcttacagatttaattcataaaaatactcaagaatatgga
gattattatgagcttttaactagagaattagataatgaaaatgtagtggtttttgatgtg
gaaagcacaggaattaatattacaaaggatgaaatagtgcaaattgcaggtatcaaaata
aacaataaaggagaagttacagaaaaatttgaaaggtttttaacacctgagaaatctgta
ggagattcttatttagtacatgggtttagtgaccaatttttaaaagaaaagggagaggat
aaagagagagttttaaaggagtttttagaattcgtaaaaggcacagtattaattgggcat
aatgtaacctttgatataactatattaaatagtgaacttcaaagattagatttagaaaaa
gcaaattttaaagcctattatgataccttagatatagcaagacggttttatccaagccta
acaaatcataaattagaaactctaagcaagttgtttaatacagaaacaaaatctagtcat
gatgccatggatgatatattggctacaaaggatgttcttatggttatgttaaaggaaaaa
gttgaacctactataataaataggatggcagtgtatggaaaatacattaaaaaatttgaa
cctatatataaagaaataactaatttaaaagaattaagttatataaaaagcccaaaggat
ataataggagaaatagttaataaaacaaagataaaggaaatatacaaataccaacatact
aagataaataatttgagagaattttttgttatagctaaagaaatagaaaataaagaaaca
tgcccaagagacaatttaatagagtttttaaaaataacttccttgtctaatagtgaatta
gatagaatgcttacaaagtatccaagagtaccaataataacagtacaccaagcaaaaggg
tcagaatttgattatgtatttttagctggacttcaaaataatacattcccaaattatatg
gccataaaagaaggaaatgaaatggaggagaaaagactattttatgtagctataactagg
gcaaagaaatctttatatctaagcttttcagaatacgaacataatagaagaaaagctaaa
agtatgcttatagattatatacctaaagattatttgaagtatatttaa
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