Clostridium sporogenes: CLSPO_c14570
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Entry
CLSPO_c14570 CDS
T03905
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cld
Clostridium sporogenes
Pathway
cld03420
Nucleotide excision repair
cld03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLSPO_c14570 (rep)
03430 Mismatch repair
CLSPO_c14570 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c14570 (rep)
Enzymes [BR:
cld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLSPO_c14570 (rep)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSPO_c14570 (rep)
MMR (mismatch excision repair)
Other MMR factors
CLSPO_c14570 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
DEAD
ResIII
AAA_30
AAA_11
B3R
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AKC62177
UniProt:
A0A7U4JN22
LinkDB
All DBs
Position
1590825..1592837
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AA seq
670 aa
AA seq
DB search
MIDYSFLDQYQKEAVKCHNYNTLIVAPPGSGKTTVIINRVVHLIEDLNINPNNILVITFT
RAAAMNMKERYKKISDSRRSPFFGTFHGLFYKILNRYYKNINIISSKEAYSLINNILISY
LDSVNEDKVRDVLNDISFFKTSGLTMDNFVPKIDKSIFEHCFNSYEEYKDKKELLDFDDL
QINMFKLLKEDERILKGYKKLFKYILVDEFQDCDTLQINILQMLSKGNSLFAVGDEDQCI
YSFRGSKPECMVNFNHYFEKGEKIYLRYNYRSPKNIVEISKNLIQNNKLRNNKKIEAYNN
YDKNIVLKSFLNEREQAEEISKIINKIINERYEYKDIAILYRTNMESRSLTDLFFKKRIP
FRLLDKGYNFFNHFVCRDILAYMQVCIDPYDKKSFLKIINKPFRYVSKLNVERVRRYKYA
KNSFDILKEQKDIQPFQIKNLENLEKDINKMNKMSTQDAIGHIMHTLGYEEYIKEYSERI
KIDKEELLQIVDELKEAGEGYTSILTFLVHVEEVEKEINKKEINEDSVILSTIHGVKGME
FKNVVIVNCNEDNIPYNKADEEINIEEERRLFYVGITRAKENLYLTVPKVIRGKNKETSN
FIKECKLDKELLENDYFKGKERVIHKVFGEGIIENQGRDYVEIVFLDGTKRKFDINVITK
SNIIKKKSVS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgatagattatagttttttagatcagtatcaaaaggaagcggttaaatgccataattat
aatacattgattgtggctccacctggttctggtaaaaccactgttattataaatagagtt
gtacatttaatagaggatttaaacataaatcctaataatatactagtaataacttttact
agagctgcagctatgaatatgaaggaaagatataaaaaaataagtgatagtagaagatca
cctttttttgggacttttcatggccttttttataaaatattaaatagatattataaaaac
ataaatataataagcagcaaagaagcctattctttaataaataatatacttatatcttat
ttggattctgtaaatgaggataaggtaagagatgttttaaatgatatatctttttttaaa
actagtgggttaactatggacaattttgttcctaaaattgataaaagtatatttgagcac
tgttttaatagctatgaagaatataaagataaaaaggagcttttagattttgatgatttg
caaattaatatgtttaagcttttaaaggaagatgaaagaattcttaagggttataaaaaa
ttatttaaatatatattagtagatgaatttcaagattgtgatacactccaaataaacatt
cttcaaatgttatctaagggtaattctttatttgcagtaggggatgaggatcaatgtata
tattcttttagaggatctaagccagagtgtatggtgaattttaaccattattttgaaaag
ggagaaaagatatatttaagatataattacagaagtcccaaaaatatagtagagatttct
aaaaatcttattcaaaataataaattaagaaataataaaaaaatagaagcttataataac
tatgataaaaatatagtgttaaaatcctttttaaatgaaagggagcaagcggaggaaata
agtaaaataattaataaaattataaatgagagatatgaatataaagatatagctatactt
tatagaactaatatggaaagtagaagtttaacagatttgttttttaaaaaaagaataccc
tttagacttttagataaggggtataattttttcaatcattttgtatgtagggatatacta
gcctatatgcaagtatgtatagatccttatgataaaaaaagctttttaaagattataaat
aaaccctttagatatgtaagtaaactaaatgtagaaagagtaagaagatataaatatgct
aaaaatagttttgatatattaaaagaacaaaaggatattcagccttttcaaataaagaat
ttagagaatcttgaaaaggatataaataaaatgaataaaatgagtactcaagatgccata
ggacacataatgcatactttaggttatgaagaatatattaaagaatatagtgaaagaata
aaaatagataaggaagagcttttacaaatagtagatgaattaaaagaagcaggggaagga
tatacaagtattttaactttcttagttcatgttgaggaagtagaaaaggaaataaataaa
aaagaaataaatgaagatagtgtaatattaagtacaatacatggggtcaaaggtatggaa
tttaaaaatgtagttattgtaaattgtaatgaagataatattccttacaataaagcagat
gaagaaattaatatagaggaagagagaagacttttttatgtaggtattacaagggcaaaa
gaaaacttatatttaactgtaccaaaggttataagagggaaaaataaagaaacctctaat
tttataaaggaatgtaagttagataaagagttactagaaaatgattattttaaaggaaaa
gaaagagttattcataaagtgtttggtgaagggatcattgaaaaccaagggagagattat
gtagagatagtatttttagatggaactaaaagaaaatttgatataaatgttataactaag
agcaatattattaaaaagaaaagtgtatcatag
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