Clostridium sporogenes: CLSPO_c25030
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Entry
CLSPO_c25030 CDS
T03905
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cld
Clostridium sporogenes
Pathway
cld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLSPO_c25030 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cld03019
]
CLSPO_c25030 (rny)
Messenger RNA biogenesis [BR:
cld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLSPO_c25030 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF2897
FUT8_N_cat
PFF1_TM
Motif
Other DBs
NCBI-ProteinID:
AKC63223
UniProt:
A0A7U4LNN0
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All DBs
Position
complement(2740496..2742037)
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AA seq
513 aa
AA seq
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MGPTKYVIIAVVIIIICVILGLYVVDKKAKEKLSEASKEARRLKEEAERDAEAKKKEAIL
EAKEEAHKLRAEVERENRERRNEVQRLERRIIQKEEALDKKSEALENKEEALNKKQQKIE
DVETHMEELHQKQRTELERISGLTTEQAKEFLLEQVRKEVKHETAVMIKEIETKAKEEAD
KKAREVITYAIQRCAADHVAETTVHVVNLPNDEMKGRIIGREGRNIRTLETLTGVDLIID
DTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAKKEVEVSIKEEGEQAT
FETGIHGLHIELTRLLGRLKYRTSYGQNVLKHSIEVSYLAGLMASELGIDPTLAKRVGLL
HDIGKAVDHEVEGPHAIIGSEIAKKYRESALVVNAIGAHHGDMEPQSLEAILVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANECEGVEKSYAIQAGREIRIMVKPEVLDDTGCIEM
ARNVVKQIESELEYPGQIKVNVIRETRAIEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaacgaaatatgtaataatcgcagtggttattataataatttgtgtgatttta
ggcttatatgtagttgataaaaaagctaaagaaaaattatcagaggcatccaaagaagct
agaagattaaaagaagaagctgaaagagatgcagaggcgaaaaagaaagaagctatatta
gaggctaaagaagaagctcataaattaagagcagaggttgaaagagaaaatagagaaaga
cgtaatgaagttcagcgtcttgaaagaagaataattcaaaaagaagaagctttagataaa
aagagtgaggcccttgaaaacaaagaagaagctttaaataaaaagcaacaaaaaatagaa
gatgtggaaacacatatggaagagcttcaccaaaagcaaagaacagaattagagagaatt
tcaggacttacaacagaacaggctaaagaatttttattggaacaggttagaaaagaagta
aaacatgaaactgcagtaatgataaaagaaatagaaactaaagctaaggaagaagcagac
aaaaaagcaagagaagtcattacatatgccatccaaagatgtgctgcagatcatgtagca
gaaactacagtacatgtggttaatcttcctaacgatgaaatgaaaggaagaataattgga
agagaaggaagaaatataagaacattagaaacgcttacaggggttgatttaataatagat
gatacaccagaagcagttatattatctggttttgatccaattagaagagaagttgcaaga
attgcattagaaaaattaatagttgatggaagaatccacccagctagaattgaagaaatg
gttgaaaaagctaagaaagaagttgaagttagtattaaagaagaaggagaacaggctacc
tttgaaacaggtattcatggtcttcacattgaattgactagattattaggtagattaaag
tacagaacaagttatggtcaaaatgtattaaagcattctatagaagtttcatatttagca
ggtcttatggcctccgaacttggaatagacccaactttagcaaaaagagtaggtttatta
catgatataggtaaggcagtagaccatgaagttgagggaccacacgcaattataggatct
gagatagctaaaaaataccgtgaatccgcattagtagtaaatgctataggagctcatcat
ggtgatatggaaccacaatctctagaagcaatacttgttcaagcggcagatgctatatct
gcagcaagaccaggggctagaagagaaactttagaagcttatataaagagattagagaag
ttagaagaaattgcaaatgagtgtgaaggtgtagaaaagtcatatgcaattcaagcggga
agagaaataagaattatggttaaaccagaggtgctcgatgatactggctgtattgaaatg
gctaggaatgtagttaaacaaatagaaagtgaacttgaatatcctggtcaaataaaggtt
aatgtcatcagagaaacccgtgccattgaatatgctaaataa
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