Clostridium sporogenes: CLSPO_c25150
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Entry
CLSPO_c25150 CDS
T03905
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cld
Clostridium sporogenes
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cld03016
]
CLSPO_c25150 (truB)
Enzymes [BR:
cld01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLSPO_c25150 (truB)
Transfer RNA biogenesis [BR:
cld03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLSPO_c25150 (truB)
Prokaryotic type
CLSPO_c25150 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKC63235
UniProt:
A0A7U4JQ34
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All DBs
Position
complement(2755553..2756422)
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AA seq
289 aa
AA seq
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MDGVINVLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPVCIGKATKIVDYIM
EGTKTYRVEMKLGTTTDTYDREGTVLEEKEVSVSSIEVEKAIEKYKGNIEQVPPMYSALK
INGQKLYDLARKGIEVEREARKIQIHDICILSIDLPYIIFDVKCSKGTYIRSLCFDIGND
LGSGAVMWNLERLEASPFNIKEAIKLEDLNEENIKQFITPIDEALKDYEKLYLNKKFEKL
VLNGVILKDRRVLDNIEENKLYRTYIEEDNFIGLGMKNAYGFKIHKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtaataaatgttttaaaaccaaagggaataacatcctttgatgtagttaga
gatataagaaaaatagcaaaaataaaaaaagttggtcacacaggtacattagatccttta
gcttctggagttcttcccgtatgtataggtaaggctacaaaaatagtggattatataatg
gagggaaccaaaacctatagagtagaaatgaaacttggaactactacggatacctatgat
agagaaggtactgtattagaggaaaaagaagttagtgtatcttctatagaagtagaaaag
gctatagaaaaatataaaggcaatatagagcaagtgccacctatgtattctgctctaaaa
attaatggtcaaaaactttatgatttggctagaaaaggtatagaggtggaaagggaagcg
agaaaaatacaaatacatgatatatgtattttaagtatagatttaccctatattatattt
gatgttaaatgttcaaagggaacttatataaggagtttgtgttttgatataggaaatgat
ttaggctcaggagcggtaatgtggaatctagaaagattggaagcaagcccctttaatata
aaagaagcaataaaattagaagatttaaacgaggaaaatataaaacaatttataacacct
atagatgaagctttaaaggattatgaaaaattatatttaaataaaaaatttgaaaagctt
gtactaaatggtgtaatattaaaagatagaagagttttagataatatagaagaaaataaa
ctatatagaacttatatagaagaggataactttataggattaggaatgaaaaatgcatat
ggatttaaaattcataaattattaacttag
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