Clostridium sporogenes: CLSPO_c25230
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Entry
CLSPO_c25230 CDS
T03905
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cld
Clostridium sporogenes
Pathway
cld03030
DNA replication
cld03430
Mismatch repair
cld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLSPO_c25230 (polC)
03430 Mismatch repair
CLSPO_c25230 (polC)
03440 Homologous recombination
CLSPO_c25230 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cld03032
]
CLSPO_c25230 (polC)
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c25230 (polC)
Enzymes [BR:
cld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLSPO_c25230 (polC)
DNA replication proteins [BR:
cld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLSPO_c25230 (polC)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLSPO_c25230 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
Rv2179c-like
tRNA_anti-codon
RNase_H_2
DEDDh_C
HHH_3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AKC63243
UniProt:
A0A7X5P9V1
LinkDB
All DBs
Position
complement(2762644..2766942)
Genome browser
AA seq
1432 aa
AA seq
DB search
MENTSVSDLQKEINKEELDIDKEIKIVRVQYFRKKNKLKIILKSISNFTKEKEDHIKNIL
KKRFSMVEDFEIICYKDLSHVTLEELSKKYWVDIVNLASSSVPIARDCLLKSKREVLEDS
INITYNNEFLCRFLSKNKFEGKLKSYIRDIFGIECNIKLEYDKSFNEEDYFKTIETMEKS
MIKNVLSEIKSKEKKVVKKENSPKPSENESKDNSIILGRSIREDSIFMKDLNENSGIVVV
CGDIFKKEVIETKTGRKIVTFFITDYTNSMTVKLFPRPKDSDRIIEEIKEGIYCKVRGEV
VNDPYARECVIMAKDIVKTTKIEKMDIAEEKRVELHMHSQMSAMDGMTPVSELVKRAAKW
GHKAVAITDHGVVQAYPDAMSEAKKSNIKVIYGIEAYLVDDGVPIVSKAGDKTIEDTFVV
FDLETTGFSSKNDKIIEIGAVKIEKGKIVDRFSEFVNPQRSIPEKITELTSITDDMVDDK
ETIDKILPRFIEFIGDSVVVAHNAAFDVSFINKNCKDLKIEFKNSVMDTVTLSRFLFPEL
KRYKLNVIAKHLGISLENHHRAVDDAKATADILLKSFEMLKEKEIITLHNLNKEFLGNIN
IKKEPTYHLIILAKNAVGLKNLYKLVSKSNLEYFFKRPRMAKSLINEYKEGLIIGSACEA
GQIYKEILKGKTKEELKNMIDFYDYLEIQPLGNNEFLVKNGSVKDEEELKEINKKICELG
EFYNKPVVGTCDVHFLDEEHEVFRRILMSGQGFSDADNQPPLYFRTTEEMLKEFEYLGEE
KAKEVVIYNTNKIADMIDQIKPIPEETFPPKIEGAEEDIRNMTIKKAHDIYGDPLPEIVE
KRLTKELNSIINNGYAVLYLIAHKLVAKSYEDGYLVGSRGSVGSSFAATMSDITEVNGLP
PHYVCSKCKYSEFFTDGSVGSGADLEDKDCPKCGTKLIKDGHDIPFETFLGFEGDKEPDI
DLNFSGEYQGVVHKYTEVLFGKGHVFKAGTIGTIAEKTAYGFVKKYLDERNIKANNAEIE
RLSKGCTGVKRTSGQHPGGIMVVPADNEIFNFTPIQHPADDTESDVITTHFDYHSISGRL
LKLDILGHDDPTVLRMLQDLTQVDPKAVPLGDPKVISLFTSTKALGVTEEDIDCPVGTYG
LPEFGTKFVRQMLLDTKPKSFAELVRISGLSHGTDVWLNNAQYFIKEGYTTIKDCISTRD
DIMVYLLQKGLPPKSAFTIMEKVRKGKGLTEEQEALMKEHDVPDWYIESCKKIKYMFPKG
HAVAYVMMAMRIAYFKVYYPRAYYATYFSVRADDFDADLIVKGEEKIKEKMNELYAMGNN
ITQKDKGLLTILEICYEMYKRGIKFLKVDLYKSNATKFLIEGDNIRPPLSALQGVGKNAA
KSIEEARSEGEFISKEDLRLRTKVTKTVIETLANHGCLRGMQETNQISLFSL
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggagaatacttcagttagcgatttgcaaaaggaaataaataaagaagagcttgatata
gataaagaaataaaaatagtaagagttcagtattttagaaaaaaaaataaactaaaaata
atactaaaatccattagtaattttactaaagaaaaggaagatcatataaaaaatatatta
aagaagagattctctatggtggaggattttgaaataatctgctataaggatttatcccat
gttaccttagaggaactttcaaaaaaatattgggtagatatagttaatttagcttcttct
tctgtgcccattgcaagagattgtcttttaaaatctaaaagagaagtgttagaagatagt
ataaatataacctataataatgaatttttatgtaggtttctttctaaaaataaatttgaa
ggtaaattgaaatcctatataagggatatatttggaatagaatgcaatataaaattagaa
tatgataaatcctttaacgaagaggactactttaagactatagaaactatggaaaagtcc
atgataaaaaatgttttaagtgaaattaaatctaaagaaaagaaagtagttaaaaaagaa
aattcaccaaagcctagtgaaaatgaaagtaaggataattctatcatactaggaagaagt
ataagagaagatagcatattcatgaaagatctaaatgaaaattctggcatagttgtagta
tgtggagatatatttaaaaaagaagttatagaaacaaagacagggagaaaaatagtaact
ttctttataacagattatactaactctatgacagttaaactgtttccaaggcctaaggat
tcagatagaataatagaagaaataaaagaagggatttattgcaaagttagaggcgaagta
gtgaatgacccttatgcaagagaatgtgtaataatggcaaaggatatagtaaaaactaca
aaaatagaaaaaatggatatagcagaggaaaaaagagtagaacttcatatgcacagtcaa
atgagtgccatggatgggatgactccagtatcagaattagtgaaaagagctgctaaatgg
ggccataaagcagtggctattacagatcatggtgtagttcaggcttatccagatgcaatg
tctgaggctaaaaaaagtaatataaaagttatatacggaatagaggcctatcttgtagat
gatggagtacctattgtatctaaagcaggggataaaaccatagaggatacttttgtagtt
tttgatttagaaacaacaggtttttccagtaaaaatgataaaataatagaaataggtgca
gtaaagatagaaaagggaaaaatagtagacaggtttagtgaatttgtaaatccacaaaga
agcataccagagaaaataacagaacttacaagcataacagatgatatggtagatgataaa
gagactatagataaaatacttccaaggtttatagagtttataggagactctgtggtagtg
gctcataatgcagcctttgatgtatcttttataaataaaaattgtaaagatttaaaaata
gaatttaaaaatagtgtaatggatacggtaacattaagcagatttttattccctgaatta
aagagatataaattaaatgttatagcaaagcatttaggcatatccctagaaaatcatcat
agagctgtggatgatgctaaagccacagcagatatcttattaaaatcttttgaaatgtta
aaggaaaaagaaataattaccttacataatttaaataaggaatttttaggaaatataaat
ataaaaaaagagcccacctatcatttaataattttggctaaaaatgcagtaggtcttaaa
aatttatataaattagtttctaaatctaatctggagtatttctttaaaagaccaagaatg
gctaaaagccttataaatgaatataaagaaggccttataataggttctgcctgtgaggcg
ggtcaaatatataaagaaatattaaagggaaaaacaaaagaagaattaaaaaatatgata
gatttttatgattatttagagatacaacccttaggtaacaatgaatttcttgtaaaaaac
ggttctgtaaaagatgaagaagaacttaaagaaataaataaaaaaatatgtgaattaggg
gagttttataataaacctgtggtgggcacctgtgatgtacattttttagatgaagaacat
gaagtatttagaagaatattaatgtcaggtcaaggctttagtgatgcagacaatcaacca
ccactttattttagaaccacagaggaaatgcttaaagaatttgaatatttaggagaggaa
aaggcaaaggaagtagtaatttataatacaaacaagatagcggacatgatagatcaaata
aaaccaattccagaggaaacttttccacctaagatagagggtgcggaagaggatataaga
aatatgactataaagaaagctcatgatatatatggagatccactccctgaaatagtagaa
aaaagattaacaaaggaattaaattctataataaataatggttatgctgtactttacttg
atagcccataaactagtagctaaatcctatgaagatggatacttggtaggttccagaggg
tccgttggatcttcctttgcagctactatgtcagatattacagaggttaatggattacct
cctcattatgtatgttctaaatgtaaatatagtgaattctttacagatggatctgtaggt
tcaggagcggatttagaggataaggattgtccaaaatgtggaactaaattaataaaagat
ggtcatgatataccctttgaaacttttttaggttttgaaggagataaagaaccggatata
gatttaaatttttcaggagaatatcaaggggtagttcataaatatacagaagttttattt
ggaaaaggtcatgtttttaaggcaggaactattggtactatagctgaaaaaactgcctat
gggtttgtaaaaaaatatttagatgaaaggaatataaaagccaacaatgcagaaatagaa
agattgtctaaggggtgtacaggagtaaaaagaacctcaggacaacatcctggaggaatt
atggttgtacctgcagacaatgaaatatttaattttacacctatacagcatccagcagat
gatacagaaagtgatgttataactactcactttgactatcattccataagtggtaggctt
ttaaaattagatatattaggtcatgacgaccctacagtacttagaatgcttcaggattta
acacaggtagatcccaaagctgtacccctaggagatccaaaggttataagtttattcaca
tctacaaaggctctaggagttacagaggaagatatagattgtcctgtaggaacctatgga
cttccagaatttggaactaaattcgtaagacaaatgttattagatactaaaccaaaaagt
tttgcagaattggttagaatatcaggattatcccatggtacagatgtatggcttaataat
gctcagtattttataaaagaggggtatactactataaaggattgtatatctacaagagac
gatataatggtgtatttacttcaaaagggactgccaccaaagagcgcttttacaataatg
gaaaaagtaagaaagggtaaaggccttacagaggaacaggaagctttaatgaaagaacac
gatgtaccagattggtatatagagtcctgtaagaaaataaagtatatgtttcctaaaggt
catgccgtagcctatgtaatgatggccatgaggatagcttattttaaagtttattatcca
agggcttattatgctacttatttttctgttagagcagatgactttgatgcagatctaata
gtaaagggagaagaaaaaataaaagaaaaaatgaatgaattatatgctatggggaataat
ataactcaaaaggataaaggtcttttaactatacttgaaatatgttatgaaatgtacaaa
agaggtataaagtttttaaaggtagatctatataaatctaatgctactaaatttttaata
gaaggagataatataagaccacctttaagtgcccttcaaggggtagggaaaaatgcagct
aaaagcatagaagaagccagatcagagggagaatttatatcaaaggaagatttaagatta
agaactaaggttactaaaactgttatagaaacactggcaaatcatggatgtttaaggggg
atgcaggaaactaatcaaatatccttatttagtctttag
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