Clostridium sporogenes: CLSPO_c25350
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Entry
CLSPO_c25350 CDS
T03905
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cld
Clostridium sporogenes
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cld03032
]
CLSPO_c25350 (topA)
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c25350 (topA)
Enzymes [BR:
cld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CLSPO_c25350 (topA)
DNA replication proteins [BR:
cld03032
]
Prokaryotic type
DNA Topoisomerases
CLSPO_c25350 (topA)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CLSPO_c25350 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
Toprim_4
HypA
DUF2621
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
AKC63255
UniProt:
A0A7U4JQ50
LinkDB
All DBs
Position
complement(2778214..2780316)
Genome browser
AA seq
700 aa
AA seq
DB search
MGQKMGQNLVIVESPAKAKTIKKYLGKNYVVEASMGHVRDLPKSQLGVDIENNYDPKYIT
IRGKGELLDKLRKEAKKSSKVYLATDPDREGEAISWHLAHVLKIDENEECRIEFNEITKT
SIKKAIKSPRKINENVVDAQQARRVLDRLVGYKISPILWSKVKWGLSAGRVQSVALRMIC
DREREIEKFIPKEYWTIECEVHKEKNKKPFIIKLTTKSGKKIEINNEEEAIEVIQDLKKG
EFIVKKIKKTKKNKNPLPPFTTSTLQQDSYKKLNFPTKKTMSIAQQLYEGIDIKGFGTVG
LITYMRTDSIRISEEAQKSTLEHIKSNFGGEYIPKTPRVFKGKKNIQDAHEAIRPTNIEI
TPTLAKESLTPQQYKLYELIWKRFVASQMASCILDSTSISIENGKYGLRASGSLIAFDGF
MKVYEYSTEEEKDSIKIPQLEENEILKEKSINKSQHFTQPPARYSEASLVKTLEENGIGR
PSTYAPIISTILDRKYVEREKKTLKPTELGDIVNNIVSEYFKQIVDLEFTADMENKLDYI
EEGKKSWREVVNDFFQPLIKSIEIAEKEIAKITIEDKVTDVICDKCGKNMVIKHGRYGDF
LACPGYPDCKNTKPIVEEIDVKCPKCGEGKVLIKKSRKGRKFYGCSNYPDCDFVSWSEPV
KEKCEECGSYMVKKQSKAKGEYYECANSECKHRKYLNNKE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaaaatgggacaaaatttagtaatagtagaatcaccagcaaaagctaaaacc
ataaagaaatatttaggaaaaaactatgtagttgaggcatcaatgggacatgtaagagat
ttacctaaaagtcagttaggtgttgatatagaaaacaattatgatcctaagtatataaca
ataagaggaaaaggtgaacttttagataagcttagaaaagaagctaaaaaaagttctaaa
gtatatttagcaacggacccggatagagagggagaagctatttcttggcatttagctcat
gtcttaaaaatagatgagaatgaggaatgcagaatagaatttaatgagataactaaaact
tctataaagaaagcaataaaatctccgagaaaaataaatgaaaatgtagtagatgctcag
caagcaagaagagttttggatagattagtaggatataaaataagccctatactatggagt
aaggttaaatggggattaagtgcaggtagagttcaatctgtggctttaagaatgatatgc
gatagagaaagagaaattgaaaaatttataccaaaagagtattggactatagaatgtgag
gtacataaggaaaaaaataaaaagcctttcataataaaattaactactaaatcaggaaaa
aaaatagagataaataatgaagaggaagctattgaagtaatacaagacttaaaaaaaggt
gaatttattgtaaaaaaaataaagaagacaaagaaaaataaaaatcctttaccacctttt
actacaagtactcttcaacaggattcttataagaaattaaattttcctactaaaaagact
atgtctatagctcaacaactatatgaaggtatagatattaaagggttcggtacagtaggt
cttataacttacatgagaacggattctataagaatatcagaagaagctcaaaaatcaact
ttagaacatatcaaaagtaattttggaggggaatatataccaaaaactccaagggttttt
aaaggaaagaaaaatatacaggatgcccatgaagctataagaccaactaatattgaaata
actcctacactggctaaggaaagtttaacacctcaacaatataaattatacgaattaata
tggaaaaggtttgtagcaagccaaatggcttcttgtattttagattcaacatctataagt
atagaaaatggcaaatatggattaagagctagtggatcattaatagcctttgatggtttc
atgaaggtatatgaatattctacagaagaagaaaaggatagtataaagatacctcaatta
gaagaaaatgaaatattaaaagaaaaatctataaataaaagtcagcattttacccaacca
ccagctaggtattcagaagcttctttagtaaaaactttagaagaaaatggtataggaaga
ccaagtacttatgctcctattatatctactatattagatagaaaatatgtagaaagagag
aaaaaaacattaaaacctacagaactaggagacatagtaaataacatagtaagtgaatat
tttaaacaaatagtggatctagaatttacagcggatatggaaaataagctagattatata
gaggaagggaaaaaatcatggagagaggtagtaaatgatttctttcagccattaataaaa
tctatagaaatagcagaaaaagaaatagcaaaaataaccattgaagataaagtaacagat
gtaatatgtgataaatgcggaaaaaatatggttataaaacatggaagatatggagatttc
ttagcatgcccaggatatccagattgtaaaaatactaaacctatagtagaggaaatagat
gttaagtgtcctaaatgtggagaaggaaaagttttgataaagaaaagtagaaaaggtaga
aagttttatggatgtagtaattatccagactgtgattttgtaagttggtcagaacctgta
aaagaaaagtgtgaagaatgtggaagttacatggtgaaaaaacaaagtaaagctaaaggt
gaatactatgaatgtgctaattcagaatgtaagcatagaaaatatttaaataataaagag
taa
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