KEGG   Clostridium sporogenes: CLSPO_c26050
Entry
CLSPO_c26050      CDS       T03905                                 
Symbol
priA
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
cld  Clostridium sporogenes
Pathway
cld03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cld00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CLSPO_c26050 (priA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cld03400]
    CLSPO_c26050 (priA)
Enzymes [BR:cld01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLSPO_c26050 (priA)
DNA repair and recombination proteins [BR:cld03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CLSPO_c26050 (priA)
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C Zn_ribbon_PriA AAA_30 T2SSE nSTAND3 Zn_ribbon_6 Viral_helicase1 SLFN-g3_helicase AAA_19 AAA_11 DUF1258 Zn_ribbon_PF0610 AAA_7 TrwB_AAD_bind nSTAND_NTPase5 AAA_22 NPHP3_N
Other DBs
NCBI-ProteinID: AKC63325
UniProt: A0A7U4JQ91
LinkDB
Position
complement(2851721..2853928)
AA seq 735 aa
MFKYAGIIVNNSSIKLDKLFTYSIPEELNKKIKIGHRVKVPFSKGNKKIDGFVLKLYENY
KDEDKVSIKAISNICEENPLLDLNRIKLVEQMKEKYLCTYLEAIKVLVPPGITKGNKEKK
ENFIFIYKDLEGKYLKENYEQIYDFVKLNDGVYNKNILNKKFGFSLSSINTLIKHGFLIQ
KNQVVNRYNEKMYRNYDEKILNGDQSLALYRILNSNRKLFLIHGVTGSGKTEIYMHLVKK
LMEKDKDSIILVPEISLTPQMVERFKGRFGKNIAVFHSKLSDGERFDEWMRVKRGEVKVA
IGARSAVFLPFKNLGSIIIDEEHESSYKSDSNPKYNARDIAELRCMNEGCKIILGSATPS
LETYYKSKNKIIDLISIKERIEGASMPEVKIVDMREELMSGNKSIFSKELFEDISTRLEK
KEQIILFLNRRGFSTFVSCRECGYVFKCKNCDISLTYHNRDSSLRCHYCGASMRIPKQCP
KCNSKYVKYFGAGTEKVEKAIKKYFPEVQTLRMDLDTTRTKNSYENIYNTFKKGEADILI
GTQMIAKGLDFENVTLVGVLAADMSLNLPDYRSGEKTFQLITQVSGRAGRGKKAGKVLIQ
SYNPENYSITSAAKSDYEGFYNKEIKIRKDMNYPPFSKILLINLSSKYENKLIKNTHKIG
IILKNIVAKYDNLNMLGPCPSPLSKIKEMYRWQIILKGNVTGDIMKEIQKIVYTSLEQVY
NDIRVSIDINPNSLL
NT seq 2208 nt   +upstreamnt  +downstreamnt
gtgtttaaatatgcaggtattatagtaaataattcttctataaaattggataaattattt
acttattctattccagaggaattaaataaaaaaataaaaataggacatagagtaaaagtt
ccctttagtaaaggcaataaaaaaatagatggtttcgttttaaaactatatgaaaattat
aaagatgaagataaagtttctataaaggctataagcaatatatgtgaagagaatccttta
ttagatttaaatagaataaagcttgtagaacaaatgaaggaaaaatatctttgtacatat
ttagaagccataaaagtattagtaccaccaggtattacaaagggaaacaaagaaaaaaaa
gaaaactttatatttatatataaagatttagagggtaaatatttaaaagaaaattatgaa
caaatatatgattttgtaaaattaaatgatggagtttataataaaaatatattaaataaa
aaatttggattttccttatcatctataaatacattaataaaacatggatttttaattcaa
aagaaccaagtagtaaatagatataatgaaaaaatgtatagaaattatgacgagaagata
ctaaatggagaccaaagtttagctctttatagaattttaaactccaatagaaaattattt
ttaatacatggtgttacaggtagtggaaaaacagagatatacatgcacttagtaaagaaa
ttaatggaaaaagataaggactctataattttagtaccagaaatatcattaactcctcaa
atggtggaaagattcaaaggtagatttggaaaaaatatagctgtatttcatagtaaactc
tctgatggtgaaagatttgatgaatggatgagagtaaaaaggggagaagttaaagtagct
ataggagcaagatctgcagtgtttttaccttttaaaaacttaggatctatcataatagat
gaagaacatgaaagtagctataaatctgatagtaatcctaaatataacgctagagatata
gcagaacttagatgcatgaatgaaggctgtaagattattttaggatcagctacaccatct
ttagaaacttattataaaagtaaaaataaaataatagatttaattagcataaaagaaaga
atagaaggggcgtctatgccagaggttaaaatagttgatatgagagaagaacttatgtca
ggcaataaatctatatttagcaaggaactatttgaagatataagcacaagattagaaaaa
aaagagcaaataatattatttttaaatagaagaggcttttctacatttgtatcctgtaga
gaatgtgggtatgtttttaaatgtaaaaattgtgatatttctttaacttatcataatagg
gatagtagcttaaggtgtcattattgtggagcaagtatgagaataccaaaacaatgtcct
aaatgtaatagtaaatatgtaaaatattttggagcaggaacagaaaaagtggaaaaagcc
ataaaaaaatatttccctgaagttcaaactttaagaatggatttagatactacaaggact
aagaattcttatgaaaatatttataatacttttaaaaagggtgaagctgatatattaatt
ggaactcaaatgatagcaaagggattagattttgaaaatgtaactttagttggagtttta
gcagcagatatgtctttaaatttaccagactatagatcaggggaaaaaacttttcaactt
ataactcaagtttcaggaagagcaggaagaggaaaaaaagcaggaaaagttttaattcaa
agttataatccagaaaattatagtataacttctgcggctaaaagtgattatgagggattt
tataataaagagataaaaataagaaaagatatgaattatcctcccttttcaaaaatattg
cttataaatttaagtagtaaatatgagaataaattaataaaaaatacacataaaattggt
ataatattaaagaatattgtagctaaatatgataacttaaatatgttaggaccttgtcct
agtccattatctaaaataaaagagatgtatagatggcaaataatattaaaaggaaatgtg
acgggggatataatgaaagaaatacaaaaaatagtttatacttcattggaacaagtttat
aatgatataagagtaagtatagatataaatcctaacagtttgttataa

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