KEGG   Clostridium sporogenes: CLSPO_c26430
Entry
CLSPO_c26430      CDS       T03905                                 
Symbol
rnjA2
Name
(GenBank) ribonuclease J 1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
cld  Clostridium sporogenes
Pathway
cld03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cld00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CLSPO_c26430 (rnjA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cld03019]
    CLSPO_c26430 (rnjA2)
Messenger RNA biogenesis [BR:cld03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CLSPO_c26430 (rnjA2)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AKC63363
UniProt: A0A7U4JQD3
LinkDB
Position
complement(2893498..2895207)
AA seq 569 aa
MRVDKERDKVKDRVKDKEKDKVKIIPLGGLNEIGKNLTVIEYKNDIVVIDCGLKFPDDDM
LGIDVVIPDITYLKKNINKVKGIFLTHGHEDHIGALPYVLREVNVPVYGTKLTLGIVETK
LKEHGLLSSVELKCIKPREIIRLQNVSVEFIRTSHSIADTVAIAIHTPLGVVLHTGDFKI
DYTPIDGHVTDLARFAEIGKRGVIAMMADSTNVERPGYTMSESTVGEAFLNIFSGVKGRI
IVATFASHIHRIQQIIRAAEKFKRKVAVSGRSMENIMEVAMKLGYIKAEKNIFISIDAIN
KYPDDQVVIITTGSQGEPMSALSRMAASEHKKVNIKPGDKVIISATPIPGNEKLVSRVIN
QLFKKGADVIYETLADIHVSGHACQEELKLMHTLLRPKYFIPVHGEYRHLKQHGELACQL
GLPENHVMVSDIGDVIEVSRECIRKNGSVVSGQVFVDGLGVGDVGNIVLRDRKHLSQDGI
LTVVVTIEKVSGSVIAGPDIISRGFVYVRESEDLMEEAKDLVKKALEECERNHITEWAAI
KTNIKDVLRGFLYEKTKRKPMILPIIMEI
NT seq 1710 nt   +upstreamnt  +downstreamnt
ttgcgagtggacaaagaaagagataaagtaaaagatagagtaaaagataaggagaaggat
aaagtaaagattattcctttaggcggcttgaatgaaattggcaaaaatttaactgttata
gaatataaaaatgatatagtagttatagattgcggccttaagtttccagacgacgatatg
ttagggatagatgtggttattcctgatataacttatcttaaaaagaatatcaataaagta
aaaggtatatttttaactcatggtcatgaagatcatataggagcattgccctatgttttg
agagaagtaaatgtaccagtatacggaactaagcttacattaggcatagtagaaaccaag
ttaaaagaacatggactactaagttctgtagagttaaaatgcataaagccaagggaaata
attagacttcaaaatgtttctgtggaatttataagaactagccacagtatagcagacaca
gtagctatagctatacatacacctttgggggttgttctccatacaggagactttaaaata
gactacacccctatagatggtcatgttacagatttagctagatttgctgaaataggcaag
cgtggagttatagctatgatggcagatagtacaaatgtagaaaggccaggctataccatg
tcagaaagtactgtaggggaagcttttctaaatatattctcaggggttaaaggaagaata
attgttgctacttttgcatctcacatccatagaattcaacaaataataagagctgctgaa
aaattcaaaagaaaagtagcagtttccggtaggagtatggaaaatattatggaagtagct
atgaagcttggatatataaaagcagaaaaaaatatatttataagcatagatgctataaat
aaatatccagatgaccaagtagttataataactacaggaagtcaaggagaacctatgtca
gctctttctagaatggcagcttcagagcataaaaaagtaaatataaagcctggcgataag
gtaattatatctgcaacacctattccaggtaatgaaaaattagtatctagggtgataaat
cagttatttaaaaagggtgcagatgtcatatatgaaacacttgcagatatacatgtatct
ggtcatgcatgccaggaagaacttaaacttatgcatacattactaagacctaaatatttt
atacctgttcatggagagtatagacacttaaaacaacatggagaacttgcttgtcaatta
ggattaccagaaaaccatgttatggtttcagatataggtgatgttatagaagtaagtagg
gaatgcattagaaaaaatggctctgtagtatcaggtcaagtatttgtagatggactaggt
gtaggagacgtagggaatatagtattaagagatagaaaacacttatctcaagatggtata
ttaacagtagttgttactatagaaaaggtttcaggttctgttattgcaggccctgatata
atatcaagaggttttgtttatgtaagagaatcagaggatttaatggaagaagctaaagat
ttagtaaaaaaagctctagaagaatgtgaaagaaatcatattacagaatgggctgcaatt
aaaacgaatataaaagatgttttaagaggattcttatatgaaaaaacaaagagaaaacct
atgatattaccaattataatggaaatatag

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