Clostridium sporogenes: CLSPO_c31040
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Entry
CLSPO_c31040 CDS
T03905
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cld
Clostridium sporogenes
Pathway
cld03030
DNA replication
cld03410
Base excision repair
cld03420
Nucleotide excision repair
cld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLSPO_c31040 (polA)
03410 Base excision repair
CLSPO_c31040 (polA)
03420 Nucleotide excision repair
CLSPO_c31040 (polA)
03440 Homologous recombination
CLSPO_c31040 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cld03032
]
CLSPO_c31040 (polA)
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c31040 (polA)
Enzymes [BR:
cld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLSPO_c31040 (polA)
DNA replication proteins [BR:
cld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CLSPO_c31040 (polA)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CLSPO_c31040 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLSPO_c31040 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
HHH_5
Imm50
InlK_D3
Motif
Other DBs
NCBI-ProteinID:
AKC63823
UniProt:
A0A7X5P6R7
LinkDB
All DBs
Position
complement(3404650..3407277)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKERLLILDSNSLLNRAFYALPDLMTGEGIHTNAIYGFVNMLLKMKEEIKPDYIVAAFD
RKAPTFRHEEYKDYKAGRKKMPEELAQQFPIVKDLLSALAINIFEIDGFEADDLIGTLSV
FAEEKGIEVYIVTGDKDALQLATDNVKVVITKKGITEKEIYDKNRMIEEFGVTPKEFIDV
KGLMGDTSDNIPGVPGIGEKTAFKLIKEYKSIEKVLENIENIRGKKLKENLHEYREQAIF
SKKLATIMCNVPIEISLEEIKSKEEYDINKVREMFKRLEFKSLINKIGKSNEEETIEEEI
SYKNIVSIEEFKGLKDNIIEYKENKLYLYFELEDIVLFSKSRIKILYVSFKDEVYRIDFE
TLLKDTKEDFIKVCKDIFESKEIKKITYDSKNPRTVLRKLGIDFNGINFDINLAAYLIDP
VRKEYEISSLASEYLFKNINREDEDLKIKEVNIMPKLYKVLEEKIKKQNIEELLYTVEQP
LTETLSAMETEGFKVDKNILLQLEKKFKGEIESTQSEIYSMSEEEFNINSPKQLGKILFE
KLDLPVIKKTKTGYSTNAEVLDKLRDKHPIIDKITYYRQLTKIYSTYIEGLKASIDEDGK
IHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGREIRKVFIPNTEDSVILSADYSQIELRV
LAHISNDKNMISAFNEHDDIHTKTASEVFKVPIDEVTPLMRSNAKAVNFGIVYGIGDFSL
SQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAIQKGYVTTILNRRRYIKEVKSSNK
IVKAAGERLAMNSPIQGSAADIIKLAMVNVHRKLKEDNFKSSIILQVHDELILNVYKDEL
EKVKALVKKEMEQVLELKVGLDVDINIGNNWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaagattattaatattagatagcaatagtttattaaatagagctttttat
gcattacctgatcttatgactggagagggaattcatactaatgctatatatggttttgtt
aatatgcttttaaaaatgaaggaagagataaaaccagattatatagtagcagcttttgat
agaaaggcacctacctttagacatgaagaatataaggactataaggcaggtagaaaaaaa
atgccagaggaacttgcacagcaatttccgatagtaaaagatcttttatccgcattggct
ataaatatatttgaaattgatggatttgaagcagacgatttaataggaactttgtctgta
tttgcagaggaaaaaggaatagaagtttacatagttacaggagataaagatgccctacaa
ttggctacagataatgtaaaagtagttataactaaaaaaggtattacagaaaaagaaatt
tacgataaaaatagaatgatagaggaatttggagttacacctaaagaatttatagatgta
aaaggtcttatgggagatacctctgacaatatacctggagtacctggaataggagaaaaa
actgccttcaagcttataaaggaatataaaagtatagaaaaggtacttgaaaatatagaa
aacataagaggaaagaaattaaaagaaaatttacatgaatatagagaacaggctatattt
agcaaaaaactagctactattatgtgtaacgtacctattgaaataagtttagaagagata
aaatcaaaggaagaatatgatataaacaaagttagagaaatgtttaaaagattagaattt
aaatctttaataaataaaataggtaaaagtaatgaggaagaaactatagaagaggaaatt
tcttataaaaatatagtttctatagaagaatttaaaggtttaaaagataatataatagaa
tataaagaaaataaattatatctatattttgaattagaggatatagttttattttctaaa
tctagaataaaaatattatatgttagttttaaagatgaagtttatagaatagactttgaa
actctgctaaaggatactaaagaagattttataaaagtatgtaaagatatatttgaaagt
aaagaaattaaaaaaattacctatgattccaagaatccaaggactgtgcttagaaaacta
ggaatagattttaatggtataaattttgatataaatttagctgcatatctaatagatcca
gttaggaaagaatatgaaatatctagtttagcttcagaatatttatttaaaaatataaat
agagaagatgaagatttaaaaataaaagaagttaatataatgcctaaattatacaaagta
ttggaagaaaaaataaaaaagcaaaatatagaagagttgttatatacggtagaacaacct
cttacagagacattatcagctatggagacagaagggtttaaagttgataaaaatatactt
ttacagctagagaaaaaatttaaaggggaaatagaaagcactcagtcagaaatatattca
atgtctgaggaagaatttaatataaattctcctaaacagttagggaaaatactctttgaa
aaattagatttacctgttataaagaaaactaagacaggatattctactaatgcagaggta
ctggataaattaagagataagcatccaataatagataagataacttattatagacagtta
acaaaaatatactctacttatatagaaggattaaaagcttctatagatgaagatgggaaa
atacattcaaattttaatcaaactgttacagctacaggaagattatctagtacagagcct
aatcttcaaaacatacctataaaatatgaaatgggaagagaaataagaaaggtatttatt
ccaaatacagaggattctgtaatactttcagcggattattcacaaatagaattaagagta
ttggcacatatatctaatgataaaaatatgataagtgcttttaatgaacatgatgatatt
catactaaaactgcatcagaagtgtttaaagttccaatagatgaagtaacccctcttatg
aggagtaatgctaaagctgttaattttggtatagtttatggtataggagattttagtcta
tctcaagatttaaatataactagaaaagaggcaaagcagtatatagatgcttatttggag
agatatcctaatgtaaaactttatttagaaaatatagtagaagaggctatccaaaagggt
tatgtaactacaatattaaatagaagaagatatataaaagaggttaaatcttcaaataaa
atagttaaagctgcaggggaaagattagctatgaacagtccaatacaaggaagtgcggca
gatataataaaattagctatggtaaatgttcatagaaaattaaaagaagataattttaaa
agtagtataatattacaagtacatgatgaattaatattaaatgtttataaagatgaatta
gaaaaagttaaagctttagtaaaaaaagaaatggagcaggttttagaattaaaggttgga
ctagacgtggacataaacataggtaacaattggtatgaagcaaagtag
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