Clostridium sporogenes: CLSPO_c35300
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Entry
CLSPO_c35300 CDS
T03905
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cld
Clostridium sporogenes
Pathway
cld03030
DNA replication
cld03430
Mismatch repair
cld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLSPO_c35300 (dnaE)
03430 Mismatch repair
CLSPO_c35300 (dnaE)
03440 Homologous recombination
CLSPO_c35300 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cld03032
]
CLSPO_c35300 (dnaE)
03400 DNA repair and recombination proteins [BR:
cld03400
]
CLSPO_c35300 (dnaE)
Enzymes [BR:
cld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLSPO_c35300 (dnaE)
DNA replication proteins [BR:
cld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLSPO_c35300 (dnaE)
DNA repair and recombination proteins [BR:
cld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLSPO_c35300 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AKC64220
UniProt:
A0A7U4LPJ5
LinkDB
All DBs
Position
complement(3855619..3859176)
Genome browser
AA seq
1185 aa
AA seq
DB search
MGKNQFNEKELEWVSLHQHTEYSLLDSSAKISDLIKRAKEFGMKSIAITDHGVMYGCVDF
YKEAIKQGIKPIIGCEIYVAAKSMYIKQQDKENETHHLVLLVKNEIGYRNLMEIVSKASV
EGFYYKPRVDHEFLKDHSEGLIALSACLGGEVQANILKGNLEKAKKVALIYKEIYKEGFY
LELQYHGMEEQLKVNETLVQMSKELDIPLVATNDVHYIRKEDYKSHDILLCIQTGKTVDE
ENRMRYPSDQFYLKSPEEMYETFSYVPEALENTIKISEECNFDYNFHESKLPKFPLEQGI
EPYEYLRKICFKGLFSRYEVLKDFMNKPFSMDEVLAYGDENKEAFDLIERLNYELSIIKQ
MGYVDYFLIVWDFIRFANEKGIMTGPGRGSAAGSLVAYTLGITKIDPIKYNLIFERFLNP
DRISMPDIDSDFCYERRGEVIDYVVEKYGKANVSQIITFGTMAARACIRDVGRAMNYPYA
EVDRIAKMIPTVLNITINKALELNPELKEAYDNEERVKELIDVARALEGLPRHTSTHAAG
VVIASQPLVNYVPLQKNEESIVTQFTMGTLEELGLLKMDFLGLRTLTVMRDAVRIIKENK
GIDIDLDTIDFEDKEVYKMIGQGKTVGVFQLESAGMTSFMKELKPDSLEDIIAGISLYRP
GPMAEIPRYIANKNNPLNIEYATEKLEPILSVTYNCIVYQEQVMQIVRDLAGYSMGRSDL
VRRAMSKKKHDVMELERKNFIYGNKEEGVKGCINNGIDEKVANNLFDSMMDFASYAFNKS
HAAAYAVVGFQTAYLIRYYPTEFIAAMLNSVKGDSDKVSSYVNFAEILGIEIVAPNINES
YSNFAVKDNRIIFGLTAVKNVGEKGIDNIVLSREQKGKFTDLSDFFNKVDTSIINKRLVE
SLIKAGAFDCLHVYRSKMLAVFEKIMDGIQKQKRNNIEGQVNLFMDIMDNKESSMDIKYP
NIKEFDKKYILQMEKEMTGLYFSGHPLEEYEETLKIQTSHHISDIISKESLEGNMVDTIN
SIKDGDKVIVGGMITHVSKKLTRNNDMMAFIVLEDLYSSIEVIVFPKTFNIARSIINEDE
VVLLKGRVSLREDEQPKLICEVMEPLVKINSEKLYILVEEQKNIKLKLQETKGIFLQHRG
NMPVYFCANKERKKFRIDRELWVNGSIKLMDDLRNTFGENNVKIL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaatcaatttaatgagaaggagctagaatgggtaagtttacatcaacataca
gaatattcattgttagattcttcagcaaagatatcagaccttataaaaagagcaaaagag
tttggtatgaaaagtattgctattacagatcatggcgttatgtatggttgtgtagatttt
tataaagaagcaataaagcaaggaataaagcctataataggctgtgaaatatatgtagca
gcaaaatctatgtacataaagcaacaggataaagaaaatgaaacacatcatttggtatta
ttggtgaaaaatgaaataggatatagaaatttgatggagatcgtatcaaaggcatctgta
gaaggattctattataaacctagagtggatcatgaatttttaaaagatcatagtgaagga
ttaatagcattaagtgcatgtttagggggagaagttcaagctaatatattaaaaggaaac
ttagaaaaagctaaaaaagtagcattaatttacaaagaaatttataaagaaggtttttat
ctagagcttcaatatcatggtatggaagagcagctaaaagttaatgaaacattagtgcaa
atgtctaaggagttagatatacctttagtagctacaaatgatgtccattatataagaaaa
gaagattataaatctcatgatatattattatgtatacaaacaggtaaaactgtagatgaa
gaaaatagaatgaggtatccatcagatcagttttatttaaaatcaccggaggaaatgtat
gaaacattttcttatgtgccagaggctttagaaaatacaattaagatatcagaagaatgt
aactttgattataatttccatgagtcaaaattacccaaatttccattagaacaagggata
gagccttatgaatatttaagaaaaatatgttttaaaggtctattttcacgatatgaggta
ctaaaggattttatgaataaacctttcagtatggatgaagttttagcctatggagatgaa
aataaagaagcttttgatttaatagaaagattaaattatgagttatccataataaaacaa
atgggatatgtagattattttttaatagtatgggattttataagatttgctaatgaaaag
ggaataatgacaggacctggaagaggatctgcagcaggatctttagtagcttatacttta
ggaataactaaaattgatcctattaaatataatctaatatttgaaagatttttaaatccc
gatcgtatatctatgccggatatagatagtgatttttgttatgaaagacgaggagaagtt
atagattatgtggtagagaaatatgggaaagcaaatgtatcacaaataataacttttgga
actatggctgcaagagcttgtataagagacgtaggaagagctatgaattatccttatgca
gaagtagacagaatagctaaaatgatacctactgttttaaatataactataaataaagct
ttggagttaaatccagaattaaaagaggcctatgataacgaagaaagggttaaagagcta
atagatgtggcaagggctttagaaggacttccaagacatacatctactcatgctgcagga
gtagttatagcatcacaacccttagtaaattatgtaccccttcaaaaaaatgaagaaagt
atagtaacacaatttacaatgggtactttggaagaactaggacttttaaagatggatttt
cttggacttagaactcttactgttatgagagatgcagtaagaattataaaagaaaataaa
ggaatagatattgatttagatactattgattttgaagataaagaagtttacaaaatgata
ggacaaggtaaaactgtaggggtattccaattagagtctgcgggaatgacatcctttatg
aaagagttaaaaccagattcattagaggatataatagcaggaataagtttatatagacca
ggacctatggctgaaataccaagatatatagctaataaaaacaatccattaaatatagaa
tatgcaacagagaaactagaacctatattgtctgttacatacaattgtatagtttatcaa
gaacaggttatgcagatagttagggatttagcaggatactctatgggacgtagtgatttg
gtaagacgtgccatgtctaagaaaaaacatgatgtaatggaactggaaagaaaaaatttc
atatatggtaataaagaagaaggggtaaaaggatgcataaataatggtatagatgaaaaa
gtagctaataatttatttgattctatgatggactttgcttcctatgcatttaacaaatct
catgcagcggcctatgctgtagtaggctttcagacagcttacttgattaggtattatcct
acagagtttatagcagctatgttgaatagtgtaaagggcgatagtgataaggtatcttct
tatgttaattttgcagaaattttaggaatagaaatagtagctcctaatataaatgaaagt
tatagtaactttgcagtaaaagacaacaggataatattcggattaactgcagtaaaaaat
gtaggagaaaagggtatagataatatagttttatctagagaacaaaagggtaaatttaca
gatttaagtgatttttttaataaagtagatacttcaattataaataaaaggttagtagaa
agtttaataaaagcaggagcctttgattgcttacatgtatatcgttctaaaatgctagct
gtttttgaaaaaataatggatggtatacaaaagcaaaaaagaaataatatagaaggccag
gtcaatttatttatggatattatggataataaagaaagtagtatggatataaaatatcct
aatataaaggagtttgacaaaaaatatatacttcaaatggaaaaagaaatgacaggattg
tatttttctggtcatccattagaagaatatgaagaaacattaaaaattcaaacaagtcac
catatatcagatattatttctaaggaatctttagaaggaaatatggtagatactataaat
agtataaaagatggagacaaagtaatagtaggtggtatgattacgcatgtaagtaaaaaa
ttaactaggaataatgatatgatggcatttatagtattagaagatttatattccagtata
gaagttatagtattccctaaaacttttaatattgctagaagtataataaatgaagatgaa
gtagttttattaaaaggaagagtaagtttaagggaggatgaacagccaaaattaatttgt
gaagtcatggaacctcttgtaaaaattaattctgaaaaattatatatattagtagaagaa
caaaagaacataaagttaaagctacaagaaacaaagggtatatttttacaacatagaggc
aatatgcctgtatatttttgtgcaaataaggaaagaaagaagtttagaattgatagagaa
ctttgggtaaatggaagtataaaattgatggatgatttaagaaatacatttggagaaaat
aatgtaaaaatactttaa
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