Cellulosilyticum lentocellum: Clole_0225
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Entry
Clole_0225 CDS
T01448
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03420
Nucleotide excision repair
cle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clole_0225
03430 Mismatch repair
Clole_0225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cle03400
]
Clole_0225
Enzymes [BR:
cle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clole_0225
DNA repair and recombination proteins [BR:
cle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clole_0225
MMR (mismatch excision repair)
Other MMR factors
Clole_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S24
HSDR_N_2
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_12
AAA_19
HSDR_N
SLFN-g3_helicase
AAA_30
ResIII
AAA_22
MerR_1
Motif
Other DBs
NCBI-ProteinID:
ADZ81978
UniProt:
F2JIQ6
LinkDB
All DBs
Position
293571..295988
Genome browser
AA seq
805 aa
AA seq
DB search
MKLNKEQLKLAENGAMGYAVIRGVAGSGKTSVGVARIPYLLEKYCNGQDKILFVTYNKSL
TKYIEYLYEKMEKVQTISLFDEANKEKNVEVKNIDSITMKYFCKWKADEQKELENIWKIP
NEIVKEAINNIKDRYPKVKLLNTQNLKFLQDEMNWIQGSNYTSLAAYQEAERFGRTVSNA
EGPSKLFKNSMSREAIFSLLEEVERLLLKQGKVDGSRANSLALEYIKTQSRHECYKHIII
DEAQDLTKVQLDFISELKEDSPESSILFLMDVAQSIYPQAWLTKGRSFKSIGYDMKGKGY
KLTKNYRTTTEISECAYSLLAKEETLVSDYDFVKPSLLERHGEYPVYRHFATSEEQNLYI
VRLIRALLKQGYSLKDIAVVSKLNKNLELLQDHLKEKGVESFVFKNNQEESFGADKVKLL
TMHSIKGLEFKVVILADLNSDVIPYPQKGLEEEELKDEEMLERKLLYVGMTRAQEKLFMC
SYGTASKFIADINTRYLSMQTGSRMNAFYRLPYGDYLYTESIAQANQEEESVRQWVICEL
MTNYGYPKSLIQLEYPVRNFSQTGKVDVVVMNAKTNTPYIFIETKKETVSIEEAIDQLKS
YMNVSKVNYGIATNGKNIAFLNDKFERISDIPICNASILPSSIETYKYVDRITLRETVFE
RDLSALEVYVAEVRQKPEELKRIKVYSDIAAGIPIEIVDEIRGTFDLPRELLRGKESVYI
LQVKGDSMIEKDIQNGDYVVIDSSAAVNDQDIAAVYYNGATTLKQVMHMGDSVLLISANP
KYEPIHIEEGDLSIMGKLVGVIKKL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaacaaggaacagctaaaattagcagaaaatggtgctatggggtacgctgtt
attaggggagtagcaggttcaggaaaaacctcagtcggtgttgctaggataccatacctt
ttagaaaaatattgtaatggtcaagataaaatattatttgtcacatataataaatccctc
actaaatacattgagtatttatatgaaaagatggaaaaggtacaaaccattagtttattt
gatgaagctaataaagagaagaatgtagaagttaaaaatatagattccatcaccatgaaa
tatttttgcaagtggaaagcagacgaacaaaaggaactagaaaatatatggaagatcccc
aatgaaatagtaaaggaagccattaataatattaaagaccgttatccaaaagtgaagcta
ttaaacacacaaaatctgaagtttcttcaagatgagatgaactggatacaaggaagtaat
tatacaagcctagcagcttatcaagaagcagagcgctttggtaggactgtaagtaatgca
gaagggccaagcaagcttttcaaaaacagcatgagccgggaagctatatttagcctgcta
gaagaagtagagcgcttgctactaaaacaaggaaaagtagatggctctcgggcaaatagc
ttagctttagagtatatcaagactcaaagtaggcatgagtgttataaacatattattata
gatgaagctcaggacctaaccaaggtgcagctagactttataagtgaattaaaagaagat
tcgccggagagctccattttatttttaatggatgtggcccaaagcatttatcctcaggca
tggcttaccaaggggaggtcctttaaaagtattggctatgatatgaagggaaaaggctat
aagctcactaaaaactatcgtactaccacagaaatctcagaatgtgcttatagtttatta
gccaaagaagaaaccttggtatctgattatgatttcgtaaaaccatctctcctagaaagg
catggtgagtatcctgtttacagacattttgcaaccagcgaggagcaaaatctttatata
gtaaggctgattagggcactgcttaagcaaggttactcattaaaggatattgcagttgta
tctaagcttaataaaaatctagaacttttgcaggaccatttaaaggaaaagggtgtagag
agctttgtctttaaaaacaatcaagaagaaagctttggagcagataaagtcaaactactg
accatgcattctattaaagggctagagtttaaggtggtcattttggcagaccttaatagt
gatgtgattccctatcctcaaaaaggtttagaggaagaagagttaaaagatgaggaaatg
ctggagcgaaagctactatatgtaggtatgacaagagcccaggaaaaactttttatgtgt
tcctatggcacagcctctaagtttatagcagatattaatacgcgttatttaagtatgcaa
acaggtagccgtatgaatgctttttaccgtttgccctacggggattatttgtatacagaa
agcattgctcaggctaaccaagaagaggaatccgttagacaatgggtgatatgtgagctc
atgacgaattacggttatccgaaaagccttatacagctagagtatcccgtgagaaacttt
tctcagacaggaaaagtagatgtggtggtgatgaacgccaagaccaatacaccttatatt
ttcatagaaactaaaaaagagactgttagcatcgaagaagccattgaccagttaaaatcc
tatatgaatgtgagtaaggtgaattacggcattgctactaatggtaagaatatagctttt
ttaaatgacaagtttgaaaggattagtgatattcctatttgtaatgcaagcattttacca
agctcaatagaaacgtataaatatgtagaccgtataacccttagagaaacggtattcgaa
agagacttaagcgccctagaagtctacgtagccgaagttcgccaaaagccagaagaacta
aagcgtattaaggtgtactcagatatagccgccggtatccctatagaaattgtagatgaa
ataagaggtacctttgatttgccaagagaactccttaggggcaaggaaagtgtttatatc
ctgcaagttaagggcgatagcatgatagaaaaagatattcaaaatggagactatgtggtg
atagattcatcagctgccgtcaatgaccaagatatagctgctgtgtattataatggtgca
actacccttaaacaagtcatgcatatgggagatagtgtgctgctcattagtgctaatcct
aaatatgaacctattcatatagaagaaggggatttgagtattatggggaaattggtaggt
gtcattaagaagctataa
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