Cellulosilyticum lentocellum: Clole_0389
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Entry
Clole_0389 CDS
T01448
Name
(GenBank) DNA glycosylase/AP lyase, H2TH DNA-binding protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cle
Cellulosilyticum lentocellum
Pathway
cle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Clole_0389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cle03400
]
Clole_0389
Enzymes [BR:
cle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Clole_0389
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Clole_0389
DNA repair and recombination proteins [BR:
cle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Clole_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Zn_ribbon_TFIIB
Anti-TRAP
Zn_ribbon_PaaD
DUF5795
Motif
Other DBs
NCBI-ProteinID:
ADZ82133
UniProt:
F2JKH3
LinkDB
All DBs
Position
488761..489588
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AA seq
275 aa
AA seq
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MLELPEVLTVSKQLKNHIVGKKISKVLPPSKVHKFCWYNGEPTEYNAAIKGSEVISVEGF
GIFVEITFSNGYKLCLNDGVNVRLVPSNEKTKNFQLLIELEDNLVLVFTVAMYGGIFLHD
GSYDNEYYLKSKQAISPFSEVFTEHYHKTFMESKPNLSAKAFLATQQRFPGVGNGVSQDI
LFEAGIHPKRKISTFSEADKERLLGKMITVLNEMVQKGGRDTEKNIFGEKGGYKVRMSKN
TMGLDCPKCGGKIIKETYLGGSIYYCAQCQPFIKE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgttagaattgccagaggtgttaactgtttctaagcaacttaagaatcatattgttgga
aagaaaatcagtaaagttttgccaccatctaaagtacataagttttgctggtataatggg
gaaccaacagaatataatgccgccattaaaggcagtgaagtgatatcggtagagggcttt
ggaatatttgttgaaataactttttctaatggctataagctatgcttgaatgatggtgtt
aatgtaaggctagtgccctctaacgaaaaaacgaaaaattttcaattacttattgagtta
gaggataatctggtattagtgtttacagtggctatgtatggaggaatcttccttcatgat
ggaagttatgacaatgaatactatttaaaaagcaaacaagctatatcaccattttccgaa
gtatttacagagcattatcataaaacatttatggagagtaagcctaatttaagtgcaaaa
gcttttcttgctacccagcagcgatttcctggagttggtaatggtgtatcgcaagatatt
ctgtttgaagcaggtatccatcctaaacgcaagattagtacctttagtgaagcagataaa
gaaagattactaggaaagatgattactgttttaaatgaaatggttcaaaagggtggacgt
gatacagagaaaaacatttttggagaaaaaggaggctataaagtaagaatgtcaaagaat
actatggggctagattgtccaaaatgtggggggaaaataataaaagaaacttatcttggt
gggtctatttattactgcgctcaatgccaaccttttattaaagaataa
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